Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0037 ATGTACTCATTAGAAAAACCACGACCCATTGATTTCTACAAAGAAGAAGAAGAAACCCCAGAAATGATGATCGAAGTGGTCCCCACCACCGACAACAACAACAATCACCACCTCCAACAACCACCACCACCGCCACCACCGTTAATGCTCACCGAGAGCAGCGGCGACGACCCAGAACTCGACCAAATCAAAGCCCCCAAAAAACGCGCCGAGACATGGGTCCAAGACGAAACGCGTAACCTAATTTCCCTTCGTCGTGAAATGGACGCGCTTTTCAACACTTCCAAATCGAACAAGCATCTTTGGGATCAGATTTCGGCGAAGATGAGGGATAAGGGTTTCGATCGTTCTCCAACTATGTGCACTGATAAATGGAGGAACTTGCTTAAGGAGTTTAAGAAAGCAAAGCACCAAGATAATAGAGGAAGTAGTAAAATGAGTTATTATAAAGAGATTGATGAGATTTTGAGAGAGAGAAGTTGTAAAAGTGTGCATTATAAGACACCCATTCCCCCAACTCTTTCTAAAGTTGATTCCTTTATGCATTTTGCTGATAAAGGTATTGAGGATACTAGCATATCTTTTGGGCCTGTTGAAGCTAATGGAAGACCAACACTCAATCTTGAGAGAAGTTTGGATCATGATGGGCATCCTCTTGCCATTACCACAGCTGACGCTGTTGCTGCAAGTGGAGTCCCTCCTTGGAATTGGAGAGAAACTCCTGACAATGGTGGGGAAAGTCAGTCATGTTGTGGAAGGGTTATATCGGTGAAATGGGGTGATTATACAAGGCGTATTGGTATTGATGGCACTGCAGAAGCCATCAAGGAGGCAATTAGGTCTGCTTTTAGATTGAGAACTAGACGTGCATTTTGGTTGGAGGATGAAGAACAAATTATCAGAAGTATTGACCGTGACATGCCCTTAGGAAATTACACTCTTCACCTTGATGAAGGAATGGCTGTTAAAGTATGTCTCTATGATGAGTCTGACCATATCTCTGTGCACACTGAAGAAAAGATCTTCTACACTGAAGATGATTACCGTGATTTTCTAACACGCCGAGGTTGGACATGTCTAAGGGAGTTTGATGGCTATAGAAATATTGACAATATGGATGATCTTCGACCTGGTGCCATATATCGTGGTGTGAGTTGA 1158 0.4335 MYSLEKPRPIDFYKEEEETPEMMIEVVPTTDNNNNHHLQQPPPPPPPLMLTESSGDDPELDQIKAPKKRAETWVQDETRNLISLRREMDALFNTSKSNKHLWDQISAKMRDKGFDRSPTMCTDKWRNLLKEFKKAKHQDNRGSSKMSYYKEIDEILRERSCKSVHYKTPIPPTLSKVDSFMHFADKGIEDTSISFGPVEANGRPTLNLERSLDHDGHPLAITTADAVAASGVPPWNWRETPDNGGESQSCCGRVISVKWGDYTRRIGIDGTAEAIKEAIRSAFRLRTRRAFWLEDEEQIIRSIDRDMPLGNYTLHLDEGMAVKVCLYDESDHISVHTEEKIFYTEDDYRDFLTRRGWTCLREFDGYRNIDNMDDLRPGAIYRGVS* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0037 385 Gene3D - 73 135 - -
Lan15g0037 385 ProSiteProfiles Myb-like domain profile. 65 129 IPR001005 -
Lan15g0037 385 Coils Coil 74 94 - -
Lan15g0037 385 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-4 5 384 - -
Lan15g0037 385 MobiDBLite consensus disorder prediction 1 59 - -
Lan15g0037 385 CDD GT1 71 136 - -
Lan15g0037 385 SMART sant 69 131 IPR001005 -
Lan15g0037 385 Pfam Myb/SANT-like DNA-binding domain 72 155 IPR044822 -
Lan15g0037 385 PANTHER - 5 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0037 Lan-Chr15 230249 234055 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0037 45 384 Trihelix Transcription Factor Family AT3G25990 72.046 0.0 512
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lan15g0037 Myb_DNA-bind_4 3.3e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0037 - - ccaj:109807736 644.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0037 15 230249 234055 Lan3g1444 3 26011709 26015407 LSH