Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0024 ATGAGTTTGGTCCATGTAGTTGGGTTTGGTTTAAAAGTGGGGCATCTACTTTTAGTGTTATGTTGCTGGATTGTGTCTATCATTTACCTCAACTGGTTAACTAAGGACACCAAGATGGGTTTTCTAGGGGTTAGTGGCAGCAAGATGTGGTGGCTGAAATTGTGGGAGAAGATCTTAGGGAATAATGTTCTAAGTCATCAATACTATTACGAGTATATCGGGTCAAAGAAAGTGAGGAAAGCATTGTGGAAGAAGCTTTTGCTGATATGGGTAATTGGTTGGTGCATAGTGTGTTTGTGGATCTTTTGTTGCATGAGCTTACAAGTGATTGAGAAGAGGAAAGAAACATTGACAAGTATGTGCGATGAAAGGGCTAGGATGCTGCAGGATCAGTTCAATGTGAGTATGAACCATATCCAAGCCATGTCCATTCTAATCTCAACCTTTCACCATGCCAAGGACCCCTCTGCCATTGACCAGAAAACTTTTGCCAGGTACACAGAAAGAACTGCTTTTGAGAGGCCCCTTACAAGCGGTGTTGCATATGCAGTAAGGGTGCTCCATTCCGAGAGGGAACAATTTGAGAAGCAACAAGGGTGGACTATTAAGAGGATGGATAACTTGGAACAGAATCCGGTTCATAAGGATGAATATGCCCCCGAGTCATTGGAGCCGTCCCCTATTAAGGAAGAATATGCTCCTGTCATCTTTGCACAGGATACAGTTTCGCATGTCATTTCTGTTGATGTGCTTTCTGGAAAGGAAGACCGTGAAAATGTGTTACGTGCAAGAGAATCAGGCAAAGGGGTATTAACTGCTCCCTTCAGGCTTCTCAAAACAAATCGTCTAGGGGTGATATTGACATTTGCTGTCTACAAGAGAGAACTTCCATCAAATGCAACCCCAAATGAAAGGATTCAAGCCACTAATGGGTATCTTGGCGGGGTCTTCGATATTGAGTCTTTAGTGGAGAAATTGCTTCAGCAACTTGCTAGCAAGCAAACAGTAATTGTTAATGTGTATGATACTACAAATCATACCCACCCTATTCCCATGTATGGTTCAAATGTATCAGGTGATGGCTTCTATCATGTTAGTGCTCTTAGCTTTGGAGATCCTTTCAGGAAGCATGAGATGCATTGCAGGTTCAAACAGACACCACCATGGCCATGGTTGGCAATAACTACATCAATTGGAATCCTTGTTATTGCACTCCTTGTTGGACATATTTTTCATGCCACTGTGAATCGAATTGCAAAAGTAGAGGATGATTACCATGAGATGATGGAGCTTAAAAAACGAGCCGAGGCAGCTGATGTTGCAAAATCCCAGTTCCTTGCTACTGTTTCCCATGAGATCAGAACACCAATGAATGGTGTGTTAGGTATGATGAACATGCTTATGGACACAGATCTAGATGTAACACAACAGGAATATGTTAGAACGGCACAGGGAAGTGGAAAAGCGTTGGTGTCAATTATAAATGAGGTTTTGGACCAGGCAAAGATTGAATCTGGCAAGCTAGAGCTCGAGGCAGTGTTGTTTGATATAAGAGCAATTTTGGATGATGTGTTGTCACTATTTTCTGAGAAGTCTCAAGCAAAAGGAATAGAGTTGGCAGTTTATGTGTCAGATCGAGTTCCTGAACAGCTAATAGGCGATCCGGGAAGGTTTCGGCAAATACTTACGAATCTCATGGGTAACTCTATCAAGTTCACAGACAAAGGGCATATCTTTATCACTATCCATCTAGTTGAGGAGGTTGTCCACTCAATAGAAGTTGACAAAGAATCGACTTCAAAAGATACCATAAGTGGTTTCGCTGTTGCTGATAGTCGCCGGAGCTGGGAAGGATTTGAAGCTTTCAGTCAAGAGGGGCCACTTGGTTCTTTGTCATCAACCTCAAGTGATCTCATCAATTTGATTGTATCTGTTGAGGATACAGGTGAAGGTATTCCTCTAGAAGCACAGTCACTCATCTTCACTCCATTCATGCAGGTCGGTCCATCGATCTCTCGAAAACATGGGGGAACAGGCATTGGTCTAAGCATTAGCAAGTGTTTGGTTAGGCTAATGAATGGAGAAATTGGATTTGTGAGTGAACCTAAGATTGGATCCACTTTCACATTTACTGCTGTGTTCACCAATGGATGTCCTAATTCAAGTGAGTGTAAATCCCAGCAAATCAATAACCGACCTCACACTGTATCCTCCGAATTTCAAGGCATGGTTGCATTAGTTATTGACCCCCGACCAGTTCGAGCTAAAGTGTCAAGATACCACGTTCAGAGACTTGGCATTCATGTTGAGTTAGTTTCAGCTTTCAATCAAGGTTTGTCCACCATAGGCAATGGCAATATAGTTATCAATATGGTCCTGATTGAACAGGAGATATGGGATAGAGATTCAGCCATTTCAACCGACTTTGTCAACAATGCTAGTAAAGTTGATCGTGGCGGTACTCCTCCTCCAAAACTATTCATTCTTGTCAATTCTAGCAGTTCTATAACATCAGGTGTTCATAATCCAACTGTCATCATAAAACCTTTAAGAGCAAGTATGCTTGCTGCTTCGCTACAACGAGCCATGGGCGTTGGGAACAAGAGGAATCTTCAAACATTATCTCTCCACCATCTTCTTCTTGGCAGGAAAATTCTAATTGTAGATGACAATAGTGTGAACCGCACCGTAGCAGCTGGTGCTTTGAAAAAGTATGGAGCTACTGTGGTTTGTGCAAGCAGTGGAAAAGACGCCATCTCTTTGCTGAAGCCACCTCATCAGTTTGATGCCTGTTTCATGGATATTCAAATGCCGGAAATGGATGGTTTTGAGGCTACAATGAGAATTAGGGAGATGGAACGCAGTATGAACAGAGAAATGTCTGTGGAAAATAGTTCAAAATGGCATATACCAATTTTGGCTATGACTGCAGATGTGATCCAAGCTACACATGAGGTATGCCTAAACTGTGGCATGGATGGATATGTTTCAAAACCATTTGAAGCTGAACAGCTTTATAGAGAAGTTTCGCGGTTTTTCCAATCATCTTGA 3051 0.4218 MSLVHVVGFGLKVGHLLLVLCCWIVSIIYLNWLTKDTKMGFLGVSGSKMWWLKLWEKILGNNVLSHQYYYEYIGSKKVRKALWKKLLLIWVIGWCIVCLWIFCCMSLQVIEKRKETLTSMCDERARMLQDQFNVSMNHIQAMSILISTFHHAKDPSAIDQKTFARYTERTAFERPLTSGVAYAVRVLHSEREQFEKQQGWTIKRMDNLEQNPVHKDEYAPESLEPSPIKEEYAPVIFAQDTVSHVISVDVLSGKEDRENVLRARESGKGVLTAPFRLLKTNRLGVILTFAVYKRELPSNATPNERIQATNGYLGGVFDIESLVEKLLQQLASKQTVIVNVYDTTNHTHPIPMYGSNVSGDGFYHVSALSFGDPFRKHEMHCRFKQTPPWPWLAITTSIGILVIALLVGHIFHATVNRIAKVEDDYHEMMELKKRAEAADVAKSQFLATVSHEIRTPMNGVLGMMNMLMDTDLDVTQQEYVRTAQGSGKALVSIINEVLDQAKIESGKLELEAVLFDIRAILDDVLSLFSEKSQAKGIELAVYVSDRVPEQLIGDPGRFRQILTNLMGNSIKFTDKGHIFITIHLVEEVVHSIEVDKESTSKDTISGFAVADSRRSWEGFEAFSQEGPLGSLSSTSSDLINLIVSVEDTGEGIPLEAQSLIFTPFMQVGPSISRKHGGTGIGLSISKCLVRLMNGEIGFVSEPKIGSTFTFTAVFTNGCPNSSECKSQQINNRPHTVSSEFQGMVALVIDPRPVRAKVSRYHVQRLGIHVELVSAFNQGLSTIGNGNIVINMVLIEQEIWDRDSAISTDFVNNASKVDRGGTPPPKLFILVNSSSSITSGVHNPTVIIKPLRASMLAASLQRAMGVGNKRNLQTLSLHHLLLGRKILIVDDNSVNRTVAAGALKKYGATVVCASSGKDAISLLKPPHQFDACFMDIQMPEMDGFEATMRIREMERSMNREMSVENSSKWHIPILAMTADVIQATHEVCLNCGMDGYVSKPFEAEQLYREVSRFFQSS* 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0024 1016 Pfam Response regulator receiver domain 885 1008 IPR001789 GO:0000160
Lan15g0024 1016 Gene3D CHASE domain 158 387 IPR042240 -
Lan15g0024 1016 CDD PRTases_typeI 842 912 IPR000836 -
Lan15g0024 1016 ProSiteProfiles Histidine kinase domain profile. 448 716 IPR005467 -
Lan15g0024 1016 Gene3D - 105 157 - -
Lan15g0024 1016 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 553 714 IPR003594 -
Lan15g0024 1016 Gene3D - 505 716 IPR036890 -
Lan15g0024 1016 Coils Coil 418 438 - -
Lan15g0024 1016 PRINTS Bacterial sensor protein C-terminal signature 641 655 IPR004358 GO:0016310|GO:0016772
Lan15g0024 1016 PRINTS Bacterial sensor protein C-terminal signature 659 669 IPR004358 GO:0016310|GO:0016772
Lan15g0024 1016 PRINTS Bacterial sensor protein C-terminal signature 676 694 IPR004358 GO:0016310|GO:0016772
Lan15g0024 1016 PRINTS Bacterial sensor protein C-terminal signature 700 713 IPR004358 GO:0016310|GO:0016772
Lan15g0024 1016 PANTHER TWO-COMPONENT HISTIDINE KINASE 55 1015 - -
Lan15g0024 1016 PANTHER HISTIDINE KINASE 3 55 1015 - -
Lan15g0024 1016 Gene3D - 880 1016 - -
Lan15g0024 1016 SMART HisKA_10 441 506 IPR003661 GO:0000155|GO:0007165
Lan15g0024 1016 ProSiteProfiles Response regulatory domain profile. 744 863 IPR001789 GO:0000160
Lan15g0024 1016 Pfam CHASE domain 157 353 IPR006189 -
Lan15g0024 1016 CDD HATPase_EvgS-ArcB-TorS-like 558 714 - -
Lan15g0024 1016 SMART REC_2 883 1009 IPR001789 GO:0000160
Lan15g0024 1016 ProSiteProfiles CHASE domain profile. 154 380 IPR006189 -
Lan15g0024 1016 ProSiteProfiles Response regulatory domain profile. 884 1013 IPR001789 GO:0000160
Lan15g0024 1016 CDD REC_hyHK_CKI1_RcsC-like 885 1009 - -
Lan15g0024 1016 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 495 711 IPR036890 -
Lan15g0024 1016 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 426 507 IPR036097 GO:0000155|GO:0007165
Lan15g0024 1016 Gene3D - 409 504 - -
Lan15g0024 1016 SUPERFAMILY CheY-like 882 1013 IPR011006 -
Lan15g0024 1016 SMART CHASE_2 154 355 IPR006189 -
Lan15g0024 1016 CDD HisKA 441 502 IPR003661 GO:0000155|GO:0007165
Lan15g0024 1016 SMART HKATPase_4 553 716 IPR003594 -
Lan15g0024 1016 Pfam His Kinase A (phospho-acceptor) domain 441 506 IPR003661 GO:0000155|GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0024 Lan-Chr15 148616 158043 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0024 1 1015 Miscellaneous Gene Families AT1G27320 68.286 0.0 1401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lan15g0024 CHASE 8.3e-38 CL0165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0024 K14489 - gmx:100776798 1684.46