Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0021 ATGGTTTCGATCCTCAAATTTCGTAGCATCTTCTCTACACGCCCGTATGGTGCCATAAGATATTGCCATTTTGGATCAGAATGGGATAAAAATATGAAATTGCCACCCAGGGTGGGGCTTTTTTGGGACTTAGACAACAAACCACCCAACTCAATTCCACCTTATGAAGTAGCCAATAAACTGAGAATAGCCGCGTCCTCCTTTGGGGTTGTTAGACACATGATCGCGTATGCAAATAGCCACACTTTTAGCCATGTCCCACTCGCTGTCCAGGAGAGGAAGAAACAGAGGGAACTCTTGAATCGCTTGGAGAACAAGGGTGTTATCAAGCCGAATGAACCTTATCTTTGTCGGGTTTGCGGGAGAAAATTCCATACCAATGAGAAGCTTGTTAACCATTTCAAGCAACTGCATGAGCGCGAGCATGCGAAAAGAGTGAATCAGATAGAGTCGGCGAGAGGGAGCAGGAGGGTGAAGCTGGTGGCTAAGTATTCGATGAAAATGGAAAAGTATAAGAAGGCTGCAAGAGCTGTTTTGACTCCGAAAGTGGGGTATGGTTTGGCGGATGAGCTGAAACGGGCAGGGTTTTGGGTTCAAACCGTGTTAGATAAGCCACAAGCTGCAGATCGTGCATTGAAAAGTCACATGGTGGATATGATGGATCATAGGCGGATTGAGTGTCTGGTCCTTGTATCAGATGATTCTGATTTTATCAATGTGATAAAGGAAGCAAAGCTACGATGTCTGAAGACGGTTGTCATCGGGGATACTCCTGATGGAGAGTTGAAGAGGACTGCCAATGCTGCCTTCTCTTGGGTGGAGATTCTGATGGGGAAGGCTAAAAAGGAGGCTGTTTCAGTTGTGGAAAATTGGAAGGATCGCGATATTTTAAACAAGTTAGAATGGACATACAACCCAGACGTAGATATAAAGAAACTCGATCCAGATAATATGGTTACTGAAGATTCTGAAGACGAGAATATTGAAGATATTTGTGATGAAGTTGACGATGCCTATAAGGATGATGGAGGTGCTTGGTGGGAACTAGATTCTGACGATGTTGACAAAAATAATCAGCCGCACAAAGCATCTATTTTATCTGTGACTAGGTGA 1113 0.4412 MVSILKFRSIFSTRPYGAIRYCHFGSEWDKNMKLPPRVGLFWDLDNKPPNSIPPYEVANKLRIAASSFGVVRHMIAYANSHTFSHVPLAVQERKKQRELLNRLENKGVIKPNEPYLCRVCGRKFHTNEKLVNHFKQLHEREHAKRVNQIESARGSRRVKLVAKYSMKMEKYKKAARAVLTPKVGYGLADELKRAGFWVQTVLDKPQAADRALKSHMVDMMDHRRIECLVLVSDDSDFINVIKEAKLRCLKTVVIGDTPDGELKRTANAAFSWVEILMGKAKKEAVSVVENWKDRDILNKLEWTYNPDVDIKKLDPDNMVTEDSEDENIEDICDEVDDAYKDDGGAWWELDSDDVDKNNQPHKASILSVTR* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0021 370 MobiDBLite consensus disorder prediction 350 370 - -
Lan15g0021 370 CDD PIN_LabA-like 126 256 - -
Lan15g0021 370 Pfam NYN domain 186 267 IPR021139 GO:0004540
Lan15g0021 370 PANTHER - 32 357 - -
Lan15g0021 370 SUPERFAMILY beta-beta-alpha zinc fingers 111 141 IPR036236 -
Lan15g0021 370 ProSitePatterns Zinc finger C2H2 type domain signature. 117 138 IPR013087 -
Lan15g0021 370 ProSiteProfiles Zinc finger C2H2 type domain profile. 115 143 IPR013087 -
Lan15g0021 370 Gene3D - 30 275 - -
Lan15g0021 370 PANTHER ZINC FINGER (C2H2 TYPE) FAMILY PROTEIN 32 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0021 Lan-Chr15 140391 141931 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0021 7 353 C2H2 Transcription Factor Family AT4G12240 58.908 4.35e-143 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lan15g0021 NYN 3.1e-07 CL0280