Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0005 ATGGGAGAAAGAGAGTCAATGTCAGTTAGGGAGGAGAAGAAAGAAGAAGAAGAAGCACAATTGGATATTTGGAAATACATATTTGGGTTCGTTGAACAAGCAGTTGTGAAATGTGGAATTGAACTTGGAATAGCTGAAGCCATTGAAAGCCATGGAGGTCCCATCACACTCTCTCACTTGTCATCAACTATAAGTTGTGACCCTTCCCTTCTTCACCGCATCATGAGATTCCTTACTTACCGCAACATATTCAAAACCATTCCCATCCATCAGGATCTGCAGGATGACTATGGCTATGGCTATATCCAGACACCCCTTTCTCGCCGTTTGATGAGAAAGGGGAAACAAAGCATGGCTGCTTTGATTCTTCTTGAGAGTAGTCCTGTGATGCTAGCACCATGGCATAGTCTAAGCACTCATGTTCTTGCCAATGGCAAACCCTCAATTCAAAAGGCATTGGGTGAAGATTTGCTAAGCTATGCTGCGGCAAATCTTGACCACAGTAATCTCTACAATGAAGGAACTGCATGTGATGCTAAGCAGACTATGAATGCCATCATTGAAGGATGCATTGAGGTTTTTGATGGTGTTAGTAGCTTGGTGGATGTGGGTGGTGGAAATGGCATCACCATGAACATCTTGGTTAAGGCTTGTCCTTGGATAAAAGGATTCAATTTTGATCTTCCTCATGTCATTGATGTGGCCCCACATTATTGTGATGGGGTGGAACATGTTGCTGGTGACATGTTTCTAAGTGTTCCTAAAGCTGATGTTGCTTTACTTATGTGGATGCTGCATAGTTGGGGAGATGAAGAGTGCATTAAGATCTTAAAGAAGTGTAAGGAAGCCGTTCCAAGGGAAAGTGGAAGGGTTATGATTGTAGAGGCAGTGATTGAAGAAGGAGGGAAACAAGGTAGCTTAAAGGATGTAGGGTTGATGCTGGACATGGTAATGATGGCACATACCAACTTTGGCAAAGAGCGGACCCTCAAAGAATGGGAATATCTTATCAAAATGGCTGGATTCACCACATACACTCTCATTCCCATCCCTAATCTTGTCAAGTCTTTGATTATGGCTTTTCCATGA 1089 0.4288 MGERESMSVREEKKEEEEAQLDIWKYIFGFVEQAVVKCGIELGIAEAIESHGGPITLSHLSSTISCDPSLLHRIMRFLTYRNIFKTIPIHQDLQDDYGYGYIQTPLSRRLMRKGKQSMAALILLESSPVMLAPWHSLSTHVLANGKPSIQKALGEDLLSYAAANLDHSNLYNEGTACDAKQTMNAIIEGCIEVFDGVSSLVDVGGGNGITMNILVKACPWIKGFNFDLPHVIDVAPHYCDGVEHVAGDMFLSVPKADVALLMWMLHSWGDEECIKILKKCKEAVPRESGRVMIVEAVIEEGGKQGSLKDVGLMLDMVMMAHTNFGKERTLKEWEYLIKMAGFTTYTLIPIPNLVKSLIMAFP* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0005 362 Pfam O-methyltransferase domain 134 342 IPR001077 GO:0008171
Lan15g0005 362 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 358 IPR029063 -
Lan15g0005 362 Gene3D - 5 110 IPR036388 -
Lan15g0005 362 Pfam Dimerisation domain 35 79 IPR012967 GO:0046983
Lan15g0005 362 SUPERFAMILY "Winged helix" DNA-binding domain 13 113 IPR036390 -
Lan15g0005 362 Gene3D Vaccinia Virus protein VP39 112 360 IPR029063 -
Lan15g0005 362 PANTHER O-METHYLTRANSFERASE 9 354 IPR016461 GO:0008168
Lan15g0005 362 PIRSF O-mtase 1 362 IPR016461 GO:0008168
Lan15g0005 362 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 362 IPR016461 GO:0008168
Lan15g0005 362 Coils Coil 361 362 - -
Lan15g0005 362 PANTHER 3'-HYDROXY-N-METHYL-(S)-COCLAURINE 4'-O-METHYLTRANSFERASE 2-LIKE 9 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0005 Lan-Chr15 41094 42528 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0005 1 342 Monolignol Biosynthesis Gene Families AT5G54160 34.091 2.06e-59 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0005 K22588 - gmx:100782951 454.907