Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g1014 ATGCAATTAGCATCAAATGGTGGCAACAAGGATGATGATAATGAAATCCAACCCATCTTGAATTACCATTTCCATTCTCCTGTCGACGCAGAAGGAGGAGACTCTTGTTCATTTTCATGTGAAATTATTCCTCCTCCTCCTCCTCTTCTCAACCATGATAATGATGATGATGATGATTTACATAATGTTCATGTAGATGTTGTTGATGAGACTTGTCATCTTGTAAATTCTTCTGATCACCACCCACAATGCCGTATATGCCTTGATATTGGAGGACAAGATTTAATTGCACCATGCCATTGCAAAGGTACTCAAAAGTATGTCCACAGATCATGTCTCGATAATTGGAGGTCTACAAAGGAGGGATTTGCCTTTTCTCACTGTACAGAGTGCAGAGCTGTTTTCATATTACGTGCTAATGTCCCACCTGATCGCTGGTGGTTGAGATTAAAGTTTCAGTTCCTTGTTTCCAGGGATCATGCTTTCATTTTTATAATTGTTCAACTCGTATGTATGCATGGGATCTTTTCTGTTTTCTCAATTGCTGCTACTCATTTCATCACATTACATTTGCCCTTTCTTTCCTTTTAG 591 0.3892 MQLASNGGNKDDDNEIQPILNYHFHSPVDAEGGDSCSFSCEIIPPPPPLLNHDNDDDDDLHNVHVDVVDETCHLVNSSDHHPQCRICLDIGGQDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFSHCTECRAVFILRANVPPDRWWLRLKFQFLVSRDHAFIFIIVQLVCMHGIFSVFSIAATHFITLHLPFLSF* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g1014 196 SUPERFAMILY RING/U-box 79 135 - -
Lan14g1014 196 ProSiteProfiles Zinc finger RING-CH-type profile. 76 138 IPR011016 GO:0008270
Lan14g1014 196 PANTHER OS02G0132300 PROTEIN 2 171 - -
Lan14g1014 196 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 2 171 - -
Lan14g1014 196 SMART ringv_2 83 132 IPR011016 GO:0008270
Lan14g1014 196 Pfam RING-variant domain 84 131 IPR011016 GO:0008270
Lan14g1014 196 CDD RING_CH-C4HC3_MARCH 84 132 - -
Lan14g1014 196 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 77 136 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g1014 Lan-Chr14 16249759 16251067 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g1014 69 170 C3H Transcription Factor Family AT1G50440 80.392 5.00e-57 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g1014 - - lang:109326181 382.104