Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g1009 ATGTTAATAAAAAGTTCCCTTAGTTCAGTTGAAACTGGTCTGTGTCGTGCATCTGATGATGGAAAAGTTGTTCTCTGTGACCGGGTTCCTAGTGGTCAAACTTGGAAGGTGTATCTGAAGCGCAATAAGTACCATCTTGATTGGTCTACAAAATCTCAGCTAATGGAAGAGAATGAAAGGAATGCCGATGATCCTTACAGCTCAAACTGTCTAAGTAGCTCAGGTGGGCCATCACCTGTGAGCATAATGACTGAAAATACTGCGCCTCAGATGGTTTACAGGAGAAAGAAGCTACGTAACTCGACTACTTCTCCTCTGAAGTTAGGACTAACAAATGTGCAGACAAGTGGCAATTGCCCCTCAGTCATAAGTTCATTTGTGCATTTACCATCAGCTGATCAACCAGTCGGTTTTCAAGCTAAGCATGAAAATGAAATGATTAAAGATTCTACTATGCCTTCTGTCTTATGTGATGGAGTAGCCAAAGAAAAGATGCAGAACATTTTAGTAATTGCCAGTGTAAATGATAGTTGCTCCTCTTCAAAATCAAATATGGAACTTGTTTTGGATTCCATAGATACTGAAATGGATGAAACTGGTGAGTGCTCATCCTCCAGTGTAATAGTTATGGATGTCACAAGGGAAGACGTAACAGAAAAGGATTTCTGCATCAATATTCTAAGAATCCATGGACTTCTTGGAGGAGATTCTCTTGCAGATAGTGTGGCATCCATGGAAGATGCTGTTACAACTGGTAATAGCTATTGTTCTCGGTCGTGCAAAACATGTGGTCATTTGGACCATTCGTTGAACATGCTTTTATGTGACCATTGTGAAGATGCATATCATCCGGCTTGCTACAATTCACGTTTGAAGAAGTTATTAGTTGATGAGTGGTTTTGTCATTCATGTCTTAAAAAACGGCAGAAAATTCTGAAGGAGACAATTATCAGATCACCTGGTATCCACAGTGAAATGGGAAAATGTAGAAGTGCCTCGGTTAATCCTGAATTGAATCACATACTGTTGATGTTAAGAGACACTAAGTCATATACAACTAGTGTGCGGGTTGGTAAAGGCTTTCAAGTGCAAGTAATTGACTGGTCAGGACCAATAAGAAGTGATGACGATGAGCTTCTGGAACCATTTGAAGTTAATCCTTCCGAATTTGATAGGCTGCAGGAGGGGAATCTCAGAAATCCAACTAGACTGAGTTCCATTAGTAATTGGCTTCAGTGTCGGGAGGTTACAGATAGAACCAAGGGAACTATATGTGGAAAATGGCGCAGAGCTCCACTTTTTGAAGTCCAAACTGAAGACTGGGAATGCTTTTGTGCTATCCATTGGGATCCATCTCATGCTGATTGTGCTGTACCTCAGGAGCTGGAAACAGATCAAGTTATGAAGCAACTGAAGTATATAGAAACGTTGAGGCAGAGAAAAACAGATTTGCAGCCAACAGTGGTGATTAAAAAAGCTATAATCTGTGGACATGATCCAACAAGGTTTAGATTATAA 1518 0.4038 MLIKSSLSSVETGLCRASDDGKVVLCDRVPSGQTWKVYLKRNKYHLDWSTKSQLMEENERNADDPYSSNCLSSSGGPSPVSIMTENTAPQMVYRRKKLRNSTTSPLKLGLTNVQTSGNCPSVISSFVHLPSADQPVGFQAKHENEMIKDSTMPSVLCDGVAKEKMQNILVIASVNDSCSSSKSNMELVLDSIDTEMDETGECSSSSVIVMDVTREDVTEKDFCINILRIHGLLGGDSLADSVASMEDAVTTGNSYCSRSCKTCGHLDHSLNMLLCDHCEDAYHPACYNSRLKKLLVDEWFCHSCLKKRQKILKETIIRSPGIHSEMGKCRSASVNPELNHILLMLRDTKSYTTSVRVGKGFQVQVIDWSGPIRSDDDELLEPFEVNPSEFDRLQEGNLRNPTRLSSISNWLQCREVTDRTKGTICGKWRRAPLFEVQTEDWECFCAIHWDPSHADCAVPQELETDQVMKQLKYIETLRQRKTDLQPTVVIKKAIICGHDPTRFRL* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g1009 505 SUPERFAMILY FYVE/PHD zinc finger 243 309 IPR011011 -
Lan14g1009 505 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 245 323 IPR013083 -
Lan14g1009 505 MobiDBLite consensus disorder prediction 56 82 - -
Lan14g1009 505 SMART PHD_3 259 305 IPR001965 -
Lan14g1009 505 ProSiteProfiles Zinc finger CW-type profile. 404 464 IPR011124 GO:0008270
Lan14g1009 505 ProSiteProfiles Zinc finger PHD-type profile. 257 307 IPR019787 -
Lan14g1009 505 Pfam PHD-finger 260 306 IPR019787 -
Lan14g1009 505 MobiDBLite consensus disorder prediction 64 82 - -
Lan14g1009 505 ProSitePatterns Zinc finger PHD-type signature. 260 304 IPR019786 -
Lan14g1009 505 PANTHER HISTONE ACETYLTRANSFERASE 30 486 - -
Lan14g1009 505 PANTHER REMODELING AND SPACING FACTOR 1 30 486 - -
Lan14g1009 505 Gene3D - 408 473 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Lan14g1009 PHD 1.1e-08 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g1009 - - gmx:100800660 688.723