Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g1004 ATGGATGACACGAACTCATTGGTGGCTCGTTGTATAGCACCCGTCAACAAGGACTTCCTCCGTCCTCCTCCTCCTCCTCTTCGTAACGACAACAACAACGACGGTTACCATAAGAATCCTATAAATGATAAAAAGTCAAAACGACAACAGAAACGTGAACGGCGTGAGGAACAGAAGTCAGCAAAAAACCTGTGTCCTGTTGTTGGAAAGACAGGAGATGTTACTTGTTGTATTTACAAAGACAAATGTCGCTTCAGCCATGATATAGACGCATTCAACGCTCAGAAACCTCCTGATGTAGAAGGAGATTGTCCTTTCTTCAAAACACAACAAGGCTATTGTCCTTATGGCTTGGTATGTAGATTTTCATCTACTCATCAACCTGCTACTACTACTACTACTCCTCCTCTTAACAACACTTCTGAAGTCAATGGATTGACCAAAAATGTTCAAAAGCTTTTATGGAAAAATAAGATCACTTTCCCTAAGGCTGACGCCAAACTCAAAACTCTCGGCCTCAAGGTAATGTCTAACTCAAAAAGGAATGACTTGGAAAATAAAGATGATGGTGGCAACACTGCTGTCAATAAAAGTGATCCTTCCTATGACAATGCCTCTCATGAAGTTACCTCTGACTCAAGTTCTAAGTTAGAAGAAGGTATAAAGGATGATGGCATAGATGAAAAATTTGAATTTGATGTATGTTGCCCTCAAAAGAGAAGAAAAACTTCCGAAAATGTAGGTTCAGCTGAACCTGTTACTGTTATCACAGAAGCAGGTGTGGGTGTTACTGAGGAAATTGATGATAGAAGCTGCATCAAAGCTGAACCTGAAGCACAAACTGATACAGTTACAACAGAAACAGGTGTGAGTGATGCGGAAGTAATTGTTCAAGGAAGCTGTATAAAAGCTGAACCTGAAGCACGGACAGATACTATCACCGCAGAAACAGGTGTACATGTTACTGAGGAAAGTGTTGAGAGAAGCTGCATAAAAGCAGAAACTGATACCATTACCCCTGAAACAGATCTAAGCTTGAAGTTGCACCCACGGGAAAAGAAGCTTATTGATTTCAAGGATAAGTTGTATCTTGCACCCTTGACCACTGTCGGAAATCTCCCTTTCAGGAGAGTTTGCAAAGTATTAGGAGCTGATGTAACATGTGGTGAAATGGCAATGTGCACAAATCTTTTGCAGGGTCAAGCTTCAGAGTGGGCGTTGTTGAGACGTCATGAATCTGAAGATTTATTTGGTGTACAAATCTGTGGGGCTTTTCCCGATACTGTTGCGCGAGCAGTTGAGCTAATAGAGCAGGAATGTTCAATAGATTTTATCGATATAAATATGGGTTGCCCTATTGACATTGTCGTGAATAAGGGTGCTGGATCAGCTCTTCTTACAAAACCAATGCGGATGAAAAGTATTGTAGAGGTAGCTTCTGGCACAGTGGATAAACCAATAACTGTCAAGGTAAGGACAGCTTATTTCGAAGGGAAGAATCGTATTGATTCTCTTATTGGTGACATGAACTCTTGGGGAGCGAGTGCAGTAACAATACATGGTAGATCACGCCAACAACGTTATAGCAAACTTGCTGACTGGGACTACATATACCGGTGTGTAAAGAAGGCCCCTAATACCTTGCAAGTAGTGGGGAATGGAGATGTTCTTTCATTTGTAGACTGGAACAATCACAGAACTGAAGCCCCTGAACTTGCTACATGCATGATTGCTCGTGGTGCACTGGTTAAACCTTGGTTATTTACAGAAATTAAGGAACAAAGGCATTGGGACATCAGTTCTGGGGAGCGGCTCAATATTCTAAAAGATTTTGTGCACTTTGGCCTTCAACACTGGGGTTCTGACACCAAAGGAGTGGAAACAACTAGGCGATTTTTGTTGGAATGGCTTAGCTACACTTGCAGATATGTTCCTGTTGGCCTTTTAGATGTGGTTCCACAAAGAATGAACTGGCGTCCACCATCTTACTATGGTCGTGATGATCTTGAGACATTGATGGCCTCAGACTCTGCTGCTGACTGGGTACGAATATCAGAGATGTTACTTGGCAAGGTTCCGGAAGGCTTTACATTTGCACCAAAGCATAAATCAAATGCCTACGATAGAGCTGAAAATGGTTGA 2142 0.4197 MDDTNSLVARCIAPVNKDFLRPPPPPLRNDNNNDGYHKNPINDKKSKRQQKRERREEQKSAKNLCPVVGKTGDVTCCIYKDKCRFSHDIDAFNAQKPPDVEGDCPFFKTQQGYCPYGLVCRFSSTHQPATTTTTPPLNNTSEVNGLTKNVQKLLWKNKITFPKADAKLKTLGLKVMSNSKRNDLENKDDGGNTAVNKSDPSYDNASHEVTSDSSSKLEEGIKDDGIDEKFEFDVCCPQKRRKTSENVGSAEPVTVITEAGVGVTEEIDDRSCIKAEPEAQTDTVTTETGVSDAEVIVQGSCIKAEPEARTDTITAETGVHVTEESVERSCIKAETDTITPETDLSLKLHPREKKLIDFKDKLYLAPLTTVGNLPFRRVCKVLGADVTCGEMAMCTNLLQGQASEWALLRRHESEDLFGVQICGAFPDTVARAVELIEQECSIDFIDINMGCPIDIVVNKGAGSALLTKPMRMKSIVEVASGTVDKPITVKVRTAYFEGKNRIDSLIGDMNSWGASAVTIHGRSRQQRYSKLADWDYIYRCVKKAPNTLQVVGNGDVLSFVDWNNHRTEAPELATCMIARGALVKPWLFTEIKEQRHWDISSGERLNILKDFVHFGLQHWGSDTKGVETTRRFLLEWLSYTCRYVPVGLLDVVPQRMNWRPPSYYGRDDLETLMASDSAADWVRISEMLLGKVPEGFTFAPKHKSNAYDRAENG* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g1004 713 CDD DUS_like_FMN 361 596 IPR035587 -
Lan14g1004 713 SUPERFAMILY FMN-linked oxidoreductases 361 674 - -
Lan14g1004 713 MobiDBLite consensus disorder prediction 15 60 - -
Lan14g1004 713 Coils Coil 41 61 - -
Lan14g1004 713 MobiDBLite consensus disorder prediction 179 219 - -
Lan14g1004 713 ProSiteProfiles Zinc finger C3H1-type profile. 103 129 IPR000571 GO:0046872
Lan14g1004 713 PANTHER TRNA-DIHYDROURIDINE(47) SYNTHASE [NAD(P)(+)]-LIKE 6 713 - -
Lan14g1004 713 MobiDBLite consensus disorder prediction 193 211 - -
Lan14g1004 713 MobiDBLite consensus disorder prediction 37 60 - -
Lan14g1004 713 Pfam Dihydrouridine synthase (Dus) 364 599 IPR035587 -
Lan14g1004 713 ProSitePatterns Uncharacterized protein family UPF0034 signature. 445 463 IPR018517 GO:0008033|GO:0017150|GO:0050660
Lan14g1004 713 Gene3D Aldolase class I 356 599 IPR013785 -
Lan14g1004 713 PANTHER TRNA-DIHYDROURIDINE(47) SYNTHASE [NAD(P)(+)]-LIKE 6 713 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lan14g1004 Dus 1.7e-50 CL0036
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g1004 K05544 - gmx:100783494 950.273