Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0996 ATGGCATATCAGGGTCCTGGTTCGGGATCGAGTTCAACTTCGGGGATTCAACTAATGAACTCACCCTTCGGTGACACAACCTACACAAAAGTATTCGTTGGAGGATTGGCTTGGGAGACTCACAGCGAAACCATGCGCCGCTACTTTCACCAATTCGGTCATATTCTAGAAGCTGTCGTTATCACTGATAAGAATACTGGCCGATCCAAAGGATATGGTTTTGTCACTTTCCGGGATCCCGAGGCTGCTAGGAGGGCTTGTGCTGATTCAGCTCCAACCATAGATGGTCGAAGGGCTAATTGTAATCTCGCTTCCCTTCGTCGACCACACCCTCCTCTGCCGCATGGACGGATAAGACTAGCCTCCCCTTACATTGGAAGTTTGCAACCAGCTCGTGGTGCTTATGTCGGAGGTTATGGCTACCAGCAACCAGTTCCCTACAATTATCAGCAAGGCCAAGGATTGATTTATCCTCCTTATGGGTATACAGCATATGGACCCGAGTACATCTACCCACAGAGCGTGTACAACCCTTACATGGGTCAGCAATACCTTCAGATATATGGAGTGCCTGGGGCAGTGAACACAACAGTTTATCCTTATGGACAATTGAGTCGGGCTATTCCTAGCAGTCATGGTTATACAGCAATGCAGGGCTATGCAGTACCTGGTCATCAGATTGTGCCCTACGGTGGGCCGAATGTTAATGCAATAACAACTTCACACGTGCCTGCCATTCAAGCACCATATCCCAGTGGAATTGCTGCACCAGTTCCAGGCCAACCCCAATTTATTGTTCCCGCTCCTTCTCAGTTTATACAAGGTAGCGGTCCTGACCAAACAGCCGGGTGA 852 0.4918 MAYQGPGSGSSSTSGIQLMNSPFGDTTYTKVFVGGLAWETHSETMRRYFHQFGHILEAVVITDKNTGRSKGYGFVTFRDPEAARRACADSAPTIDGRRANCNLASLRRPHPPLPHGRIRLASPYIGSLQPARGAYVGGYGYQQPVPYNYQQGQGLIYPPYGYTAYGPEYIYPQSVYNPYMGQQYLQIYGVPGAVNTTVYPYGQLSRAIPSSHGYTAMQGYAVPGHQIVPYGGPNVNAITTSHVPAIQAPYPSGIAAPVPGQPQFIVPAPSQFIQGSGPDQTAG* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0996 283 SUPERFAMILY RNA-binding domain, RBD 28 140 IPR035979 GO:0003676
Lan14g0996 283 CDD RRM_RBM24_RBM38_like 29 104 - -
Lan14g0996 283 PANTHER BOULE-RELATED 4 279 IPR037366 GO:0003729
Lan14g0996 283 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 29 106 IPR000504 GO:0003723
Lan14g0996 283 PANTHER RNA-BINDING PROTEIN 38-LIKE ISOFORM X1 4 279 - -
Lan14g0996 283 SMART rrm1_1 30 102 IPR000504 GO:0003723
Lan14g0996 283 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 31 88 IPR000504 GO:0003723
Lan14g0996 283 Gene3D - 24 108 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0996 Lan-Chr14 16158177 16177980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0996 1 107 C2H2 Transcription Factor Family AT2G19380 36.449 4.39e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0996 - - gmx:100782606 499.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0996 14 16158177 16177980 Lan14g0996 14 16158177 16177980 ECH