Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0984 ATGATGGTTTCGAGCTGGGATGGAAGTGGCAGCCAGTCGGATGACCTTTTTGATAGGTTGCACATTGAGCCTATGTACGATGCTTTCGTGTGTCCTCTCACGAAGCAACTTATGTGCGATCCTGTTGCTTTAGAAAATGGACAGACTTTTGAACGTGAAGCAATTGAGAAATGGTTCAAGGAATGCAGGGAGAGTGGACGGAAACTGGTTTGCCCTTTAACTCTCCAGGAATTAAAAAGCACAGAACTGAATCCAAGTATGGCTTTGCGTAACACCATTGAAGAGTGGACTGTCAGGAATGAAGCTGCGCAGCTGGATATGGCTCGCCGCTCCTTGAATACGGGGAGTCCAGAAAATGAAACTCTTCAGGCCTTGAAGTATGTCCAGCATATCTGCAAAAGAAACCGGTCAAATAAGCATATTGTCCGCCAAGCAGGCCTTATACCGATGATAGTTGACATGCTGAAGAGTAGTAGCCGTAAGATTCGTTGTAGAGCTTTGGAAACCCTTAGAGTTGTGGTAGAGGAAGACGATGAGAATAAGGAAATGTTGGCGGAAGGCGACATTGTGCGTACAATAGTAAAATTTCTTAACCACGAGCTTTCTAAAGAAAGAGAGGAAGCTGTTTCTTTGCTTTATGAGCTCTCTAAGTCTGAAGCCCTATGTGAGAAGATTGGTTCAATAAATGGAGCTATTCTTATATTAGTTGGAATGACTAACAGCAATTCTGAAGATCTTTCCACTGTTGAAAAGGCTGATAAAACATTAGAGAATCTGGAGAAGTGCGAGAATAATGTGCAGCAAATGGCTGAAAATGGAAAATTGCAGCCTCTTCTGACCCAACTTCTTGAAGGTCCACCAGAAACCAAACTGGCCATGGCTGGATACCTTGGTGAGCTGGTTTTGGACAATGATGTTAAAGTCCTTGTTGCAAGAACTGTGGGTTCATCTTTGATCAATATAATGAAAAGTGGTAATATGCAGTCAAGAGAAGCTGCACTGAAGGCACTAAATCAGATATCATGTGGGCCAAGCGCAAAGATTTTAATAGAGGCTGGAATTCTTTCCCCTCTTGTCAATGACCTTTTTGCAGTGGGTCCTAATCAGCTTCCGACACGATTAAAAGAGGTCTCTGCTACAATTCTCGCCAGTGTCGTGAACTCAGGGGAAGACTTCGATTCTATTCCGTTTGGACCTGATCACCAAACTCTGGTCTCAGAGGTCATAGTGCATAACCTACTCTATCTTATAAGCAACACTGGTCCAGCAATTCAGGGCAAACTTCTCCAAGTTCTCGTTGGGCTTACGAATTCTCAAACTACAGTTGTGAGTGTTATTGCTGCTATCAAAAGCTCTGGTGCCACTATCAGTCTAGTTCAATTCATTGAGGCATCGCAAAGAGATTTACGCATAGCCTCAATAAAACTTCTTCAGAATCTATCACCCCACATGAGTCAGGAACTAGCTGATGCATTGCGTGGCTCAGTTGGACAGCTTGGTAGTCTAATTAGAGTCTTATCAGAAAATACAGGAATCACTGAAGAGCAAGCAGCAGCTGTTGGCCTTCTAGCTGATCTACCCGAGAGGGATTTGAGCCTCACGAGACAGCTGCTAGACGATGGTGCTTTTCAGACGATCATATCTAGGGTGATTGCCATCAGGAAGGGAGAGATCAGAGGCAGTCGTTTCATAACGCCGTTTCTTGAAGGACTGGTGAAGGTTCTTGCAAGGGTTACATATGTCTTGGGTGATGAACCTGATGCCCTTGCACTCTGCCGGGATCACAATCTTGCTGCACTGTTTATCGAACTGCTTCAGGCCAATGGACTTGATAATGTACAGATGGTTTCCGCTACAGCTCTGGAGAATTTATCGCTACAGTCACAAAATCTAACAAAAATACCCGAGTTACCATCGCCAGGTGTTTGCGCTTCAATCTTTACATGCTTCGGCAAACAGCAGGTGATAACTGGAATGTGTAGGATCCACCGAGGGATATGTTCTTTAAAAGAAACATTTTGTCTTTTAGAAGGGCGGGCAGTCGGTAAGTTAATAGCTGTACTGGACCACACAAATGTGAAGGTGGTTGAGGCAGCACTTGCAGCTTTGTCTACTTTAATAGAAGATGGTGTGGTTATTGAGCAAGGTGTATTGGTGCTGTGTGAAAAAGAAGGAGTGCAGCCTATACTTGATGTGTTAATTGAGAAAAGGACAGAAAATTTGAGGAGGAGGGGAGTTTGGGCAGTGGAGAGACTACTGCGAACCGAAGATATAGCATATGTGGTGTCCGGAGCTCAAAATGTGAGTACTGCACTTGTGGATGCTTTTCAGCATGGTGACTATAGAACTAGGCAGATTGCCGAGCGCGCACTCAAGCATGTTGATAAGATACCCAACTTCTCTGGAATCTTTCCAAATGTGATGACCTCCTAG 2433 0.4423 MMVSSWDGSGSQSDDLFDRLHIEPMYDAFVCPLTKQLMCDPVALENGQTFEREAIEKWFKECRESGRKLVCPLTLQELKSTELNPSMALRNTIEEWTVRNEAAQLDMARRSLNTGSPENETLQALKYVQHICKRNRSNKHIVRQAGLIPMIVDMLKSSSRKIRCRALETLRVVVEEDDENKEMLAEGDIVRTIVKFLNHELSKEREEAVSLLYELSKSEALCEKIGSINGAILILVGMTNSNSEDLSTVEKADKTLENLEKCENNVQQMAENGKLQPLLTQLLEGPPETKLAMAGYLGELVLDNDVKVLVARTVGSSLINIMKSGNMQSREAALKALNQISCGPSAKILIEAGILSPLVNDLFAVGPNQLPTRLKEVSATILASVVNSGEDFDSIPFGPDHQTLVSEVIVHNLLYLISNTGPAIQGKLLQVLVGLTNSQTTVVSVIAAIKSSGATISLVQFIEASQRDLRIASIKLLQNLSPHMSQELADALRGSVGQLGSLIRVLSENTGITEEQAAAVGLLADLPERDLSLTRQLLDDGAFQTIISRVIAIRKGEIRGSRFITPFLEGLVKVLARVTYVLGDEPDALALCRDHNLAALFIELLQANGLDNVQMVSATALENLSLQSQNLTKIPELPSPGVCASIFTCFGKQQVITGMCRIHRGICSLKETFCLLEGRAVGKLIAVLDHTNVKVVEAALAALSTLIEDGVVIEQGVLVLCEKEGVQPILDVLIEKRTENLRRRGVWAVERLLRTEDIAYVVSGAQNVSTALVDAFQHGDYRTRQIAERALKHVDKIPNFSGIFPNVMTS* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0984 810 SUPERFAMILY ARM repeat 447 796 IPR016024 -
Lan14g0984 810 Pfam U-box domain 27 100 IPR003613 GO:0004842|GO:0016567
Lan14g0984 810 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 43 7 806 - -
Lan14g0984 810 CDD RING-Ubox_PUB 29 76 IPR045210 -
Lan14g0984 810 Gene3D - 568 798 IPR011989 -
Lan14g0984 810 Gene3D - 315 482 IPR011989 -
Lan14g0984 810 SUPERFAMILY ARM repeat 110 546 IPR016024 -
Lan14g0984 810 SMART arm_5 262 302 IPR000225 GO:0005515
Lan14g0984 810 SMART arm_5 135 175 IPR000225 GO:0005515
Lan14g0984 810 SMART arm_5 667 708 IPR000225 GO:0005515
Lan14g0984 810 SMART arm_5 177 217 IPR000225 GO:0005515
Lan14g0984 810 SMART arm_5 585 626 IPR000225 GO:0005515
Lan14g0984 810 Gene3D - 111 314 IPR011989 -
Lan14g0984 810 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 7 806 - -
Lan14g0984 810 Coils Coil 249 272 - -
Lan14g0984 810 SMART Ubox_2 28 96 IPR003613 GO:0004842|GO:0016567
Lan14g0984 810 SUPERFAMILY RING/U-box 21 106 - -
Lan14g0984 810 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 18 110 IPR013083 -
Lan14g0984 810 ProSiteProfiles U-box domain profile. 24 103 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0984 Lan-Chr14 16112472 16116920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0984 5 807 U-box Gene Family AT1G76390 64.268 0.0 1013
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0984 - - adu:107460240 1367.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0984 14 16112472 16116920 Lan14g0984 14 16112472 16116920 ECH