Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0980 ATGAAAGGTGGAAAGTCAAAGACCGAATCCAAGAGAGCTGATCCTAAACTTGCTGTGAATAAGAAGGGTGGAGCCACCGCCAAAGGTACTCGGAAACCTGCAAAGGCGAAGGCAGCAAAAGATCCTAACAAGCCAAAGAGGCCTCCAAGTGCTTTCTTCGTTTTCATGGAGGAATTTAGGAAGCAATTCAACAAAGAAAATCCTAACAACAAAGCAGTATCAGCTGTGGGAAAAGCTGCTGGTGCAAAGTGGAAGACGTTGTCCGAGGCCGATAAAGCACCGTATGTTGCAAAAGCCGAGAAACGAAAGCAGGACTATGAGAAGAGCATGAAAGCTTATAACAAGAAGCAGGAAGAAGGTCCTACTGCTGCTGAGGAAGAATCTGAGAAGTCGTTGTCCGAGGTGGAGGATGATGATGAGGACGATGATGATGAGGAGGATGATGATGAGGAGTAG 456 0.4649 MKGGKSKTESKRADPKLAVNKKGGATAKGTRKPAKAKAAKDPNKPKRPPSAFFVFMEEFRKQFNKENPNNKAVSAVGKAAGAKWKTLSEADKAPYVAKAEKRKQDYEKSMKAYNKKQEEGPTAAEEESEKSLSEVEDDDEDDDDEEDDDEE* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0980 151 SMART hmgende2 44 115 IPR009071 -
Lan14g0980 151 PANTHER HIGH MOBILITY GROUP B PROTEIN 2-RELATED 1 148 - -
Lan14g0980 151 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 45 114 IPR009071 -
Lan14g0980 151 MobiDBLite consensus disorder prediction 94 129 - -
Lan14g0980 151 Coils Coil 96 116 - -
Lan14g0980 151 MobiDBLite consensus disorder prediction 1 18 - -
Lan14g0980 151 MobiDBLite consensus disorder prediction 1 51 - -
Lan14g0980 151 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 1 148 IPR031061 -
Lan14g0980 151 Gene3D High mobility group box domain 29 143 IPR036910 -
Lan14g0980 151 SUPERFAMILY HMG-box 34 125 IPR036910 -
Lan14g0980 151 MobiDBLite consensus disorder prediction 130 151 - -
Lan14g0980 151 Pfam HMG (high mobility group) box 45 114 IPR009071 -
Lan14g0980 151 MobiDBLite consensus disorder prediction 87 151 - -
Lan14g0980 151 CDD HMGB-UBF_HMG-box 45 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0980 Lan-Chr14 16086649 16088271 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Lan14g0980 HMG_box 1.8e-24 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0980 K25507 - lang:109352139 173.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0980 14 16086649 16088271 Lan14g0980 14 16086649 16088271 ECH