Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0977 ATGGGAAATTGTTTCACAAAGCCAAGTAACAATGATAACAAGATTAAGCAAAGGCTTTCTAATATCTCCACCAATAATCCAGAAACTACTACTCCTTCAGAAAATGTCATCAAAGTTGGAGAAGCAGAAAAGAAAAGAGGGGATGGAAAGAATAATAATAAGATAGGCAGTGAAAAGAATGTGAGGGGAAATATGAAAATGTTTACACTGGCAGAGTTGAAAAGTGCGACAAGAAATTTCAGACCAGACACAATGGTAGGAGAAGGTGGTTTTGGTCGTGTTTTCAGAGGATGGATTGATGAGAAGACTTTGAAGCCTTCCAAAGTTGGTGTTGGAATCCCTGTTGCAATTAAGAAGTCTAGCCCTGATAGCCTTCAAGGCCTCCAAGAATGGCAGTGTGAAGTGAAATTCTTGGGGAAATTCTCTCATCCAAATCTGGTTAAATTAATTGGGTATTGCTGGGAGGAAAATCAATTCTTGCTTGTATATGAATACATGCAAAAGGGCAGCTTGGAAAGCCACCTCTTCAGAAGAGGTGTAGAACCACTTTCTTGGGATACAAGAATTGAGATAGCCATAGGAGCAGCAAAAGGTCTTGCATTCTTGCACAATTCAGAAAACTCAGTAATCTATAGAGACTTCAAGTCTTCTAACATTTTGCTTGATGAGGATTATAATGCAAAGCTATCAGATTTTGGGTTAGCAACGTTTGGCCCCATAAATGGCATATCACACATAACTACAAGGATTGTTGGCACCCATGGTTACGCTGCCCCTGAATATCTGGCCACAGGTCATCTCTATGTGAAAAGTGACGTGTATGGATTTGGTGTTGTTCTTCTAGAAATATTAACCGGGTTGATAGCATTTGACCCAGAGAGACCCATGGGTGAACAAAATTTGGTTGATTGCAAAAAATCATCTCTTACATACAAAAAGAAACTAAAAAGAATAATGGATCCAAGTATGTGTGGAAAGTATTCAATAGCATCAGCTTTTCAAATAGCCCAGCTTATACTTAAATGTTTAGATTCTGATCACAAAAAACGACCTTCTATGGAAGAGGTTTTGCATATCTTAGAGAAGGCCCAAAGCATAAAATACAAGCCCAACATCAAGAAAGTAAACTCAAGATGTCAAACAAGTAATTCAACCAACAAGACATTGGTATAA 1173 0.3819 MGNCFTKPSNNDNKIKQRLSNISTNNPETTTPSENVIKVGEAEKKRGDGKNNNKIGSEKNVRGNMKMFTLAELKSATRNFRPDTMVGEGGFGRVFRGWIDEKTLKPSKVGVGIPVAIKKSSPDSLQGLQEWQCEVKFLGKFSHPNLVKLIGYCWEENQFLLVYEYMQKGSLESHLFRRGVEPLSWDTRIEIAIGAAKGLAFLHNSENSVIYRDFKSSNILLDEDYNAKLSDFGLATFGPINGISHITTRIVGTHGYAAPEYLATGHLYVKSDVYGFGVVLLEILTGLIAFDPERPMGEQNLVDCKKSSLTYKKKLKRIMDPSMCGKYSIASAFQIAQLILKCLDSDHKKRPSMEEVLHILEKAQSIKYKPNIKKVNSRCQTSNSTNKTLV* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0977 390 MobiDBLite consensus disorder prediction 38 55 - -
Lan14g0977 390 PANTHER SERINE/THREONINE-PROTEIN KINASE CX32, CHLOROPLASTIC-RELATED 26 380 - -
Lan14g0977 390 MobiDBLite consensus disorder prediction 19 36 - -
Lan14g0977 390 ProSitePatterns Protein kinases ATP-binding region signature. 86 119 IPR017441 GO:0005524
Lan14g0977 390 MobiDBLite consensus disorder prediction 19 59 - -
Lan14g0977 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Lan14g0977 390 Gene3D Transferase(Phosphotransferase) domain 1 166 386 - -
Lan14g0977 390 Gene3D Phosphorylase Kinase; domain 1 64 165 - -
Lan14g0977 390 SUPERFAMILY Protein kinase-like (PK-like) 55 368 IPR011009 -
Lan14g0977 390 Pfam Protein kinase domain 83 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan14g0977 390 PANTHER OS01G0588500 PROTEIN-RELATED 26 380 - -
Lan14g0977 390 ProSiteProfiles Protein kinase domain profile. 80 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan14g0977 390 CDD STKc_IRAK 86 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0977 Lan-Chr14 16072411 16076278 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0977 3 360 Glycoside Hydrolase AT3G07070 42.742 3.40e-88 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lan14g0977 Pkinase 2.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0977 - - aprc:113865973 525.398