Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0972 ATGTCTGCTATGGCTGCTCTCCGTCGCGAAGGGAAGCGTTTCGCCACTCTCCTCCCTTCTCATTCCATTCGTTCTTCTCTCTCCTCTCCCTCTCTAGATCAAGCCCCCGTTGGAGCTCGATCTATTTCAACTCAAATAGTCAGAAACCGTATGAAGAGTGTGAAGAATATCCAGAAAATCACCAAGGCTATGAAGATGGTTGCAGCCTCAAAGCTACGAGCTATTCAGACTAGAACTGAAAATTCGCGTGGCCTTTGGCAGCCATTTACTGCCCTTCTGGGTGACACACCTAGTGTTGGTGTCAAAAAAACTGTTGTTGTTACCATTTCTTCAGACAAAGGTCTGTGTGGTGGAATCAATTCTACCTCTGTGAAGATAAGCAGGGTTTTGAGTAAATTGAACTCTGGGCCTGATAAGGAGACAAAGTATGTCATATTGGGAGAGAAGGCTAAGGCTCAATTGACACGTGACTCGAAGAAAGACATTGAGATCATCATAACTGAGTTGCAGAAAAATCCTCTGAACTATACTCAGGTGTCTGTCCTGGCTGATGACATTCTAAAGAATGTTGAATATGATGCCTTAAGGATTGTGTTCAACAAATTTGAATCAGTTGTCTCCTTTCTTCCAACAGTGTCGACTGTATTATCTCCTGAGGTTGTGGAGAGAGAGGCCGAAGCTGGGGGAAAGCTTGGAGAGCTGGACTCATATGAGATTGAAGGTGGTGATACAAAATCAGAAATTCTCCAGAATCTTGCTGAGTTCCAGTTTTCTTGTGTCATGTTCAATGCGGTGTTGGAGAATGCTTGCAGTGAGCAAGGAGCTAGGATGTCTGCCATGGACAGCTCAAGCAGGAATGCTGGAGACATGCTCGACCGTCTCACCCTCACTTATAACAGAACTCGTCAAGCATCAATTACCACCGAATTGATTGAGATTATCTCTGGAGCTTCTGCACTGACCGGTTAA 969 0.4489 MSAMAALRREGKRFATLLPSHSIRSSLSSPSLDQAPVGARSISTQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQTRTENSRGLWQPFTALLGDTPSVGVKKTVVVTISSDKGLCGGINSTSVKISRVLSKLNSGPDKETKYVILGEKAKAQLTRDSKKDIEIIITELQKNPLNYTQVSVLADDILKNVEYDALRIVFNKFESVVSFLPTVSTVLSPEVVEREAEAGGKLGELDSYEIEGGDTKSEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGDMLDRLTLTYNRTRQASITTELIEIISGASALTG* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0972 322 ProSitePatterns ATP synthase gamma subunit signature. 306 319 IPR023632 -
Lan14g0972 322 Gene3D ATP synthase, gamma subunit, helix hairpin domain 47 317 - -
Lan14g0972 322 PRINTS ATP synthase gamma subunit signature 101 120 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lan14g0972 322 PRINTS ATP synthase gamma subunit signature 193 210 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lan14g0972 322 PRINTS ATP synthase gamma subunit signature 267 286 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lan14g0972 322 PRINTS ATP synthase gamma subunit signature 298 319 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lan14g0972 322 PANTHER BNAA05G10580D PROTEIN 3 320 - -
Lan14g0972 322 Hamap ATP synthase gamma chain [atpG]. 41 320 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lan14g0972 322 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 45 320 IPR035968 GO:0015986|GO:0045261|GO:0046933
Lan14g0972 322 CDD F1-ATPase_gamma 43 317 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lan14g0972 322 PIRSF ATP_synthase_gamma 12 320 - -
Lan14g0972 322 Pfam ATP synthase 45 320 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lan14g0972 322 TIGRFAM ATPsyn_F1gamma: ATP synthase F1, gamma subunit 43 320 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lan14g0972 322 Gene3D - 67 279 - -
Lan14g0972 322 PANTHER ATP SYNTHASE GAMMA CHAIN 3 320 IPR000131 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0972 Lan-Chr14 16029482 16033137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0972 14 320 Primary Pumps ATPases AT1G15700 30.986 7.04e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0972 K02136 - gmx:100813657 530.791