Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0943 ATGGATGATCCTGGGCATCGTGAAAATGGAAGGCACAAACCAGATCAATATAAGTCTGCTCAAGGACAGTGGTTGATGCAACACCAGCCTTCCATGAAGCAGATTATGGCACTTATGGCTGAAAGAGATGCAGCCATTCAAGAAAGAAGCCTGGCTCTTTCTGAGAAAAAGGCAGCACTTGCAGAGCGTGACATGGCATTCCTGCAGCGAGATACTGCAATTGCAGAACGAAATAATGCAATTATGGAACGTGATAACGCAATTGCAGCTCTTCAGTATCGAGAGAGCTCCTTAACTAGCGGTAGCATGTCATCCTGTCCTCCAGGATGCCAAATCTCACGTGGTGTCAAGCATATACATCATCCCCAGCAACAGGTACACCAATTACATAATATGGGTGATACTTCTTATGGCACACGGGATATGCACACAACTGATGCTCTCCCAGAATCACCCATCCCTTTGGAGGCTGGGAAACCACGACGGGCCAAGCGACCAAAGCAAGCTAAGTCAATTTCACCAAACAAGAAGATTTCAAAAACTGCAAGAAAAGTCAAGATGGAGAGCGAAGACTTGAATGACATAATGTTTGGCAAGATGCGCGAATGGAAGAGTGGCCAAGAAATGTTTAATGGAGGTGATGATCTTAACAAGCAGTCAGTGGTGTCAAAGGCTGATTGGAAAGGCCAGGACTTGGGGTTGAATCAAGTCGCATATGACGAGTCTACCATGCCGGCTCCATTTTGCTCTTGTACCGGTGTTCTGAGGCAGTGCTACAAATGGGGTAATGGGGGTTGGCAGTCTGCTTGTTGCACAACAACCCTGTCAGTTTATCCACTTCCAGCAGTGCCCAACAAGAGGCATGCTCGGGTAGGTGGTCGGAAGATGAGTGGAAGTGCTTTCAATAAGTTGCTTAGTCGGCTTGCTGCAGAAGGCCATGATCTGTCGAACCCCATTGATCTCAAGGACCATTGGGCCAAACATGGTACAAATCGATACATCACAATAAAGTAG 1014 0.4694 MDDPGHRENGRHKPDQYKSAQGQWLMQHQPSMKQIMALMAERDAAIQERSLALSEKKAALAERDMAFLQRDTAIAERNNAIMERDNAIAALQYRESSLTSGSMSSCPPGCQISRGVKHIHHPQQQVHQLHNMGDTSYGTRDMHTTDALPESPIPLEAGKPRRAKRPKQAKSISPNKKISKTARKVKMESEDLNDIMFGKMREWKSGQEMFNGGDDLNKQSVVSKADWKGQDLGLNQVAYDESTMPAPFCSCTGVLRQCYKWGNGGWQSACCTTTLSVYPLPAVPNKRHARVGGRKMSGSAFNKLLSRLAAEGHDLSNPIDLKDHWAKHGTNRYITIK* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0943 337 Coils Coil 51 71 - -
Lan14g0943 337 SMART GAGA_bind_2 1 337 IPR010409 -
Lan14g0943 337 MobiDBLite consensus disorder prediction 1 15 - -
Lan14g0943 337 Pfam GAGA binding protein-like family 1 337 IPR010409 -
Lan14g0943 337 MobiDBLite consensus disorder prediction 1 21 - -
Lan14g0943 337 PANTHER - 1 337 IPR010409 -
Lan14g0943 337 MobiDBLite consensus disorder prediction 141 185 - -
Lan14g0943 337 PANTHER PROTEIN BASIC PENTACYSTEINE6 1 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0943 Lan-Chr14 15839289 15842364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0943 65 337 BBR or BPC Transcription factor family AT5G42520 64.931 1.23e-120 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Lan14g0943 GAGA_bind 1.4e-106 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0943 - - gmx:100783502 603.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0943 14 15839289 15842364 Lan14g0943 14 15839289 15842364 ECH
Lan15g1206 15 20514640 20517528 Lan14g0943 14 15839289 15842364 LSH
Lan14g0943 14 15839289 15842364 Lan3g1270 3 24754695 24757837 LSH