Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0903 ATGGCTGCATCCATAGCCTCTTCCTTCTTTTCTTCTTCCATCAACACTGTTAAATGTCTTCCTTCAATAACAACATCAACCAACCGTATCATGTTACCATCTCTCTCACTCTCCTATATAGTAGAACCTTTGTCCATTGGTACAATCTCACACAAGTTATGGGACCCCAAAGTTTCTGTTGCTGTTGCAGAACAAGAAGTGGTTGTTGCTGCTGAGGTTGATGTTGAAGAAAAGGTGGAGGTGAACACTAAGCTATATTTTGGGAATTTGCCTTATAATGTGGATAGTGCTCAACTTGCAGGGTTAATTCAGGATTATGGTAGTGCAGAACTAATTGAGGTTCTTTATGACAGGGACACTGGAAAAAGCAGAGGCTTTGCATTTGTGACAATGAGTTGCATTGAAGATTGTAATGCAGTAATAGAAAATCTTGATGGAAGGGAGTTCACGGGTCGAACATTGCGGGTGAACTTCTCTAACAAACCAAAACCAAAACAACCCTTGTACCCGGAAACTGAACACAAGCTTTTTGTTGGGAACTTGTCATGGTCAGTAACTTCTGAGAGTCTGATACAAGCCTTTCAAGAATACGGAAATGTGGTCGGGGCTAGGGTCTTATATGATGGCGAAACTGGAAGGTCGCGAGGTTATGGCTTCGTTTGCTATTCAACAAAAGCAGAAATGGAATCTGCCCTTGCATCCTTGAATGATGTGGAAATAGAAGGAAGGGCAATACGTGTAAGCTTGGCTGAAGGAAAACGTTCACAAGGTTAA 774 0.4186 MAASIASSFFSSSINTVKCLPSITTSTNRIMLPSLSLSYIVEPLSIGTISHKLWDPKVSVAVAEQEVVVAAEVDVEEKVEVNTKLYFGNLPYNVDSAQLAGLIQDYGSAELIEVLYDRDTGKSRGFAFVTMSCIEDCNAVIENLDGREFTGRTLRVNFSNKPKPKQPLYPETEHKLFVGNLSWSVTSESLIQAFQEYGNVVGARVLYDGETGRSRGYGFVCYSTKAEMESALASLNDVEIEGRAIRVSLAEGKRSQG* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0903 257 SMART rrm1_1 84 157 IPR000504 GO:0003723
Lan14g0903 257 SMART rrm1_1 175 248 IPR000504 GO:0003723
Lan14g0903 257 PANTHER TRANSFORMER-2-RELATED 62 255 - -
Lan14g0903 257 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 83 161 IPR000504 GO:0003723
Lan14g0903 257 SUPERFAMILY RNA-binding domain, RBD 166 254 IPR035979 GO:0003676
Lan14g0903 257 Gene3D - 164 257 IPR012677 -
Lan14g0903 257 PANTHER 31 KDA RIBONUCLEOPROTEIN, CHLOROPLASTIC 62 255 - -
Lan14g0903 257 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 174 252 IPR000504 GO:0003723
Lan14g0903 257 Gene3D - 62 163 IPR012677 -
Lan14g0903 257 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 85 155 IPR000504 GO:0003723
Lan14g0903 257 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 176 246 IPR000504 GO:0003723
Lan14g0903 257 SUPERFAMILY RNA-binding domain, RBD 74 167 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0903 Lan-Chr14 15598099 15600383 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0903 65 253 Eukaryotic Initiation Factors Gene Family AT3G16380 30.516 3.22e-18 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0903 - - lang:109326572 464.536