Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0901 ATGGACCAGTTAAACTCGTCCCTTTCGGAAGATGAATATCAGATGGAAATGATGATGATGCAGTTCCCTGAATTTTCTGCAGCTTATGGCCAAAACGACACTGTTGAGAAGTTTCCACAACCAGAGTTCAGCGGCGGCGCTGTTAACACTAACCCTCCTATGCCTTGGTCTTCATTTACAAACTCACCATCCGTTTCAATCTCTTTCACCAATAACCCTACTCAAGTGCTTCACCAACATGAACAAAACCGACCACCTATGTTGTCGAATTCCGTCAAGGAAAGTTGGAAACCCAGCAACATGTTGGAGGCTGCAAATCCATATGAGAAGCGAAACTCGATGGCAGCGATGAGGGAAATGATATTCAGGATAGCATCCATGCAACCAATACACATAGACCCAGAATCATTGAAACCACCAAAACGAAGGAACGTGAAAATTTCAAAAGATCCTCAAAGCGTTGCAGCACGACACCGTAGAGAAAGAATAAGCGAGAAGATAAGGATACTACAAAGACTCGTGCCTGGAGGAACTAAAATGGACACTGCTTCAATGTTGGATGAAGCAATTCACTACGTCAAGTTTCTCAAGTCTCAGGTTCAGTCACTTGAACGAGTTTCCAATGGAAGCAATACAAGACCAGTTCATGCTTCAGGAATAGGTTTCCCTGTTGCAATGAATCCTTTACCTAAACCTTATCAAGCTTGA 708 0.4322 MDQLNSSLSEDEYQMEMMMMQFPEFSAAYGQNDTVEKFPQPEFSGGAVNTNPPMPWSSFTNSPSVSISFTNNPTQVLHQHEQNRPPMLSNSVKESWKPSNMLEAANPYEKRNSMAAMREMIFRIASMQPIHIDPESLKPPKRRNVKISKDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIHYVKFLKSQVQSLERVSNGSNTRPVHASGIGFPVAMNPLPKPYQA* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0901 235 PANTHER BASIC HELIX-LOOP-HELIX (BHLH)-LIKE PROTEIN 2 227 - -
Lan14g0901 235 CDD bHLH_AtIND_like 148 204 - -
Lan14g0901 235 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 2 227 IPR045843 GO:0003700|GO:0006355
Lan14g0901 235 Pfam Helix-loop-helix DNA-binding domain 157 196 IPR011598 GO:0046983
Lan14g0901 235 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 151 207 IPR036638 GO:0046983
Lan14g0901 235 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 147 196 IPR011598 GO:0046983
Lan14g0901 235 SMART finulus 153 202 IPR011598 GO:0046983
Lan14g0901 235 Gene3D - 146 213 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0901 Lan-Chr14 15586916 15588401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0901 113 221 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 80.180 1.07e-47 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan14g0901 HLH 1.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0901 - - gmx:100815041 245.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0901 14 15586916 15588401 Lan14g0901 14 15586916 15588401 ECH