Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0860 ATGACTCCTGATTCTCTGAACCCGCCAGGTCCTTCCATAAAAGATCAAAATAAACTCTTATGTGTTCCTAATAATCATGATTCAACTTCTTTCCCATGTCGTGCCTTCTTTCAAATACACGATCAAAGACAAAGTGGAGATATCAGATTCTTTGGACATGATGATCAAAAGGGTTACAAGCGGGTATTTCATGGAGAATCATCAAGCACTCACCAAGTGTACAACAATTTATCCTTCGTTTCATCTCATGAGCCAGTTATGGCAGATCCAAGCAGTGCATGTGACCATAATTTGTCCATGTACAAAATAGAGCTGCAAGAAGAGAACAAAAGCAGTTACGAGTCTGCAAGATACATGAATTCAAAGATAAGGTTGACGAGAAAAATGATGAGCTCCTCCACTAACCCTTCTAGTTACAAGAGCAATAGCATCAACACTAGGGTTTGTGCAGATTGTAACACAAGCAGTACCCCACTGTGGAGGACTGGTCCTAATGGTCCTAAGACACTTTGCAATGCATGCGGCATTAGACAAAGGAAAGCAAGAAAGGCAATGGCAGAAGCTTCAAACAATTTTACTGCTTCCACAGATGCATCAATAGCTTCAAAGACTAAAGTGCATCACAAGGAAAAGAATAATAAGAAGAAGAATAAGTGCAAGGCCTCTCCTACTTCTTCTGTAACTACTACTCGAGGCACATCTCAAGGGGAAAGGAAGCTTCATTTCAAGGACTTTGATATTAATATTAGGAATAACTCACCCATTCAGCTTCTGAGAGATGAAGAAGTAGCTCAGGCAGCGCTGCTTCTAATGGATTTATCTTCTGGCTTTGTTCACTTTTAA 843 0.4021 MTPDSLNPPGPSIKDQNKLLCVPNNHDSTSFPCRAFFQIHDQRQSGDIRFFGHDDQKGYKRVFHGESSSTHQVYNNLSFVSSHEPVMADPSSACDHNLSMYKIELQEENKSSYESARYMNSKIRLTRKMMSSSTNPSSYKSNSINTRVCADCNTSSTPLWRTGPNGPKTLCNACGIRQRKARKAMAEASNNFTASTDASIASKTKVHHKEKNNKKKNKCKASPTSSVTTTRGTSQGERKLHFKDFDINIRNNSPIQLLRDEEVAQAALLLMDLSSGFVHF* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0860 280 PANTHER GATA TRANSCRIPTION FACTOR 22-RELATED 10 279 - -
Lan14g0860 280 PANTHER GATA TRANSCRIPTION FACTOR 22-RELATED 10 279 - -
Lan14g0860 280 MobiDBLite consensus disorder prediction 219 235 - -
Lan14g0860 280 Gene3D - 143 189 IPR013088 GO:0006355|GO:0008270
Lan14g0860 280 MobiDBLite consensus disorder prediction 201 235 - -
Lan14g0860 280 CDD ZnF_GATA 148 180 IPR000679 GO:0006355|GO:0043565
Lan14g0860 280 Pfam GATA zinc finger 149 183 IPR000679 GO:0006355|GO:0043565
Lan14g0860 280 SMART GATA_3 143 194 IPR000679 GO:0006355|GO:0043565
Lan14g0860 280 ProSiteProfiles GATA-type zinc finger domain profile. 143 179 IPR000679 GO:0006355|GO:0043565
Lan14g0860 280 ProSitePatterns GATA-type zinc finger domain. 149 174 IPR000679 GO:0006355|GO:0043565
Lan14g0860 280 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 145 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0860 Lan-Chr14 15279373 15282023 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0860 147 279 C2C2-Gata Transcription Factor Family AT5G49300 38.519 3.39e-18 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Lan14g0860 GATA 4.9e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0860 - - gmx:102659929 227.639