Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0859 ATGGGTGCTTCTGGAAAATGGGTCAAATCACTAATCGGATTCAACAAGCCTCACAAGGATGAACAAGTGAAAGAGTGTGGTAAGAACAAGAAGTGGTGGTTATGGAGAAGTTCTACTACTACTACTACTACTAAGGGTTACAAAGGAAAGCAGAAAGCAGAAAGTGAAGAAGAAGAGTGTGATGATGCTTATACAGTAGCAGTGGCTACAGTGGTTCGAGCTCCTCCTAAGGATTTTAGACTTGTTAGACAAGAATGGGCTGCTATTCGAATCCAAACTACTTTCCGTGCCTTCTTGGCAAGAAGGGCTTTGAGGGCATTGAAGGCAGTGGTGAGGATTCAAGCTCTTGTTCGGGGTCGACAGGTTAGGAAGCAGGCTGCAGTGACATTGAAGTGCATGCAGGCCTTAGTTCGAGTTCAAGCTCGAGTAAGAGCTCGCCGCGTGCGCATGTCCATAGAGGGCCAAGCAGTCCAGAACATCCTTAATGAGAGACACTCCAAGTCTGATCTATTGAAGCAAGCAGAGGAAGGATGGTGTGACAGCACTGGAACATTAGAAGATGTTCAAGCAAAGATACAAATGAGACAAGAAGGGGCTTCCAAGAGAGAGAGAGCAATAGCATATGCTCTTGCTCAGAAGCAAGTGAGTTCAACACCAAGCTGCAATTCAAGAACAAAAGCCACATTTTCCTCTCTGAAGAATCATGATGCCGACAAAGCGAATGGGGGATGGAGTTGGTTGGAACGTTGGATGGCAGCAAAGCCTTGGGAGAATAGATTAATAGAACAATCACATGCTGAAGGCTCAGATAAAAGCAAAAAGCCACCACCACCTCGAAAGAAATTTCCGGACTCATTAGCAACAAGCTCAAATTCGAAACCATCATCAGAACTAGGCTCAGTAAAAGTCAAGAAGAACAATGTCACTACAAGGATTTCTGCTAGGCCTCCTCCAAATGTTGGACAATCTACACGTTCATCCTCGAGTCCAAGTTCTGAATTTCTTAATGATGAGAGTTCTCCATCATCTATTTGTACATCTAAAACACCATTCTCTGGAAACACTTGTGACAGGACTGTGTATAATTGTAACACTAGGCCTAGTTACATGAACCTGACTCAGTCAACCAAGGCAAAGCACAAAACAAGCAATCAAATGTATAACAGATCACAAAGGCAAAAATCCATGGATGAGTTTCAGTTTCTCAAAAAGGCAGCATTTTTTTCCAATGGTGATTCCAAAAGCAATGCTGGTTCTGACCATTCAATCAACTTTTCTAGGCCACTTTACCTACCAACTCAAACTCACTTGTATAAGATCTCAACACAGTCAAGGTGA 1338 0.432 MGASGKWVKSLIGFNKPHKDEQVKECGKNKKWWLWRSSTTTTTTKGYKGKQKAESEEEECDDAYTVAVATVVRAPPKDFRLVRQEWAAIRIQTTFRAFLARRALRALKAVVRIQALVRGRQVRKQAAVTLKCMQALVRVQARVRARRVRMSIEGQAVQNILNERHSKSDLLKQAEEGWCDSTGTLEDVQAKIQMRQEGASKRERAIAYALAQKQVSSTPSCNSRTKATFSSLKNHDADKANGGWSWLERWMAAKPWENRLIEQSHAEGSDKSKKPPPPRKKFPDSLATSSNSKPSSELGSVKVKKNNVTTRISARPPPNVGQSTRSSSSPSSEFLNDESSPSSICTSKTPFSGNTCDRTVYNCNTRPSYMNLTQSTKAKHKTSNQMYNRSQRQKSMDEFQFLKKAAFFSNGDSKSNAGSDHSINFSRPLYLPTQTHLYKISTQSR* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0859 445 ProSiteProfiles IQ motif profile. 108 135 IPR000048 GO:0005515
Lan14g0859 445 Gene3D - 82 135 - -
Lan14g0859 445 SMART iq_5 106 127 IPR000048 GO:0005515
Lan14g0859 445 SMART iq_5 83 105 IPR000048 GO:0005515
Lan14g0859 445 MobiDBLite consensus disorder prediction 265 280 - -
Lan14g0859 445 Pfam IQ calmodulin-binding motif 108 125 IPR000048 GO:0005515
Lan14g0859 445 Pfam IQ calmodulin-binding motif 86 105 IPR000048 GO:0005515
Lan14g0859 445 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 435 - -
Lan14g0859 445 ProSiteProfiles IQ motif profile. 84 112 IPR000048 GO:0005515
Lan14g0859 445 MobiDBLite consensus disorder prediction 284 349 - -
Lan14g0859 445 MobiDBLite consensus disorder prediction 265 349 - -
Lan14g0859 445 PANTHER IQ-DOMAIN 5-RELATED 1 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0859 Lan-Chr14 15267104 15269876 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0859 1 434 IQD Protein Family AT2G26180 57.306 8.80e-140 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0859 - - gsj:114408830 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1108 15 19940397 19943655 Lan14g0859 14 15267104 15269876 LSH
Lan10g0911 10 13597657 13600238 Lan14g0859 14 15267104 15269876 PCT
Lan14g0859 14 15267104 15269876 Lan10g0911 10 13597657 13600238 PCT