LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan14g0853	ATGGAGGATCTGAAAGAGGAAGAAGAGAAGAGAGGGGAAGAAGAATTAGGTTCAAGCTTGACGATGGAGAAAGTAGCGGCTGCTAAGAAATTCATAGAGAATCATTATAGGGCACAGATGAAGAACATACAAGACCGCAAGGAAAGGCGTTGGGTTTTAGAACGAAAATTAGCTTCTTCAGATGTGCCAAACGAAGAACGGATCAACCTCATCAAAGATTTAGAAAGGAAGGAGACTGAATATATGCGACTAAAAAGGCACAAGATTTGTGTAGATGATTTTGAGCTTTTGACCATCATTGGAAGGGGGGCCTTTGGAGAGGTTAGACTGTGTCGAGAGAAGAAATCTGGGAATATTTATGCCATGAAAAAGCTGAAGAAATCTGAAATGCTCAAGAGAGGCCAGGTGGAACATGTTAGAGCTGAGAGGAATTTGCTGGCTGAAGTTGCCAGCCATTGCATTGTGAAACTATACTACTCATTTCAGGATGCTGACTACTTGTATCTGATTATGGAGTATCTGCCTGGAGGTGATGTCATGACTCTACTGATGAGGGAAGACACCTTGAATGAAGATGTTGCTAGGTTTTACATTGCACAGAGTGTTCTGGCCATAGAGTCTATTCACAGGCACAATTACATTCACAGAGATATTAAACCAGATAATCTGCTTCTGGATAAAAATGGTCACATGAAGCTCTCAGATTTTGGCCTCTGTAAGCCTCTCGATTGTACAACCCTGTCTACACTGCATGAACATCATCAGACCATGGATGATGAAAAATCAGTAGAGCCAATGGATATTGATGGATGTTTTCCTGACACGGACAATCGTAGCAGCTGGAGAAGTCCACGTGAACAGCTTCAGCATTGGCAGATGAACAGAAGGAAGTTGGCATTTTCAACAGTGGGGACACCAGACTACATTGCACCTGAAGTACTTTTGAAAAAAGGATATGGGATGGAATGTGATTGGTGGTCACTGGGAGCAATACTGTACGAAATGCTGGTTGGTTACCCTCCATTTTACTCCGATGACCCAATAACCACATGCAGAAAGATTGTTCATTGGAGAAACCATTTAAGGTTTCCAGAAGATGCCCACTTGACACTTGAGGCTAAGGATCTAATATACAGGTTGCTATGTGATGTCGATCATAGGTTAGGTACTCAAGGGGCACGTGAAATCAAGGCTCATCCTTGGTTCAGGGGCGTGGAGTGGGAGAAACTGTATGAAATGGAGGCAGCCTTTAAACCACAAGTTAATGACGAGCTGGATACCCAAAACTTCATGAAGTTTGATGAAGTAGATCCACCAACAGCAGCAAGAACTGGGTCTGGATCCTCACGAAAGATGCTAACTCCCAAAGATCTTAACTTTGTTGGTTACACGTACAAGAACTTCGATGCTGTAAAAGAAGGGCTTCGCCAGTCTCTTGGTGAATCCATTCAAGAATACGCTTCCAAACGAGCAGCAGAGGAAGCAAGCTTACAAATGCTTGCCTCATCCGGGGATCCCATGTTACCATAA	1530	0.4327	MEDLKEEEEKRGEEELGSSLTMEKVAAAKKFIENHYRAQMKNIQDRKERRWVLERKLASSDVPNEERINLIKDLERKETEYMRLKRHKICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMLKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDADYLYLIMEYLPGGDVMTLLMREDTLNEDVARFYIAQSVLAIESIHRHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCTTLSTLHEHHQTMDDEKSVEPMDIDGCFPDTDNRSSWRSPREQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAILYEMLVGYPPFYSDDPITTCRKIVHWRNHLRFPEDAHLTLEAKDLIYRLLCDVDHRLGTQGAREIKAHPWFRGVEWEKLYEMEAAFKPQVNDELDTQNFMKFDEVDPPTAARTGSGSSRKMLTPKDLNFVGYTYKNFDAVKEGLRQSLGESIQEYASKRAAEEASLQMLASSGDPMLP*	510

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan14g0853	509	ProSiteProfiles	Protein kinase domain profile.	94	402	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lan14g0853	509	ProSitePatterns	Protein kinases ATP-binding region signature.	100	123	IPR017441	GO:0005524
	Lan14g0853	509	Pfam	Protein kinase domain	95	243	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lan14g0853	509	Pfam	Protein kinase domain	294	402	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lan14g0853	509	Gene3D	Transferase(Phosphotransferase) domain 1	301	420	-	-
	Lan14g0853	509	Gene3D	Transferase(Phosphotransferase) domain 1	178	245	-	-
	Lan14g0853	509	Pfam	Protein kinase C terminal domain	421	465	IPR017892	GO:0004674\|GO:0005524\|GO:0006468
	Lan14g0853	509	PANTHER	AGC (CAMP-DEPENDENT, CGMP-DEPENDENT AND PROTEIN KINASE C) KINASE FAMILY PROTEIN	13	489	-	-
	Lan14g0853	509	ProSiteProfiles	AGC-kinase C-terminal domain profile.	403	475	IPR000961	GO:0004674\|GO:0005524\|GO:0006468
	Lan14g0853	509	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	213	225	IPR008271	GO:0004672\|GO:0006468
	Lan14g0853	509	CDD	STKc_NDR_like	92	466	-	-
	Lan14g0853	509	Gene3D	Phosphorylase Kinase; domain 1	421	431	-	-
	Lan14g0853	509	Gene3D	Phosphorylase Kinase; domain 1	92	177	-	-
	Lan14g0853	509	SMART	pkinase_C_6	403	467	IPR000961	GO:0004674\|GO:0005524\|GO:0006468
	Lan14g0853	509	PANTHER	SERINE/THREONINE-PROTEIN KINASE	13	489	-	-
	Lan14g0853	509	SUPERFAMILY	Protein kinase-like (PK-like)	77	452	IPR011009	-
	Lan14g0853	509	SMART	serkin_6	94	402	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan14g0853	Lan-Chr14	15205901	15214087	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan14g0853	1	508	AGC Kinase Gene Family	AT4G33080	80.626	0.0	840

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_NDR	Lan14g0853		Pkinase	3.1e-43	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan14g0853	K08790		-	gmx:100815717	939.102

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lan14g0853	14	15205901	15214087	Lan14g0853	14	15205901	15214087	ECH