Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0852 ATGGAGGAGGTGCCATCCGAGGTTGCAGTGCCTTTAAGAGTAGCCGATTTAGTGTGTGATAAGTCAACCATAGCTGCACACATGGATGTGTCCGGACTTAAGATGATGACAGATACAAGTTTTTTATATAATTCTATAACCAAGTTTTCCTCTGAGACCGTTATAGGTTCTGACGAGGATCATAATAATGGTTGCAATATGAACGGTGAACTTGGTATTACGGCAGTCACACTTGTGCCATCAAAACAGGGAGGAGAAAGAGAAGTTCCTTTCTTGGATATGATATCCCAAAATAAAGGCACTTTGGTTGTTGGCGATGAAGTTTTAACACCAGAAACGGAGGATGATTCGTTATCATTAGAAGGTGATCCAACTCCAATTATTGATATCTCTTGTTCTTTTTCAGTAGCCAGTAGCATATGCGGAGATGAGTTGGCCACTTATGAGGCTATTGCTGATTTAGGGATATCGAGTTCCTTTGACATAGAGAAGAGCATCTGTGTTGTTAGTGTTGTTGCCGAAGCATATACTGCGGATTTGGCAGAGTCGAATGATATGGCAGATATTATGACTGAACCCCTGGCAGTAGCAGTGACCCTTGAAGAAGAAACTAGAATTAGATCTGCCCCAAATCCTACTGCAGTTGTTCTTCATCAGCTACCTCTGGAAAAAAGGGTGAATGGAACAGTTGGTCGGAGTGTTTTTGAATTGGAATGGACCCCACTTTGGGGGTTTACATCTGTGTGTGGAGAAAGACCTGAGATGGAAGATGCAGTTGCAGTTGTACCTCGGTTTTCGAAAATTCCTATTCAAATGCTCATTGGTGATAGGGTAATTGATGGAATGGACAAGTGTTTCAGTCAGCAGACAACTCATTCCTTTGGAGTCTATGATGGTCATGGTGGCTCTCAGGTGGCAAACTATTGTCGTGATCATCTACATTTGGCCTTGGCCGAGGAAATAGAATTTGTCAAGGAAGGTCTAATAGTTGGAAATACCAAGGATGATTGTCAAGATCAGTGGAAAAAAACTTTCACCAATTGTTTTTTAAAGGTTGATGCTGAAGTTGGAGGGAAAGCTTATTGTGAACCTGTTGCCCCAGAAACTGTTGGATCCACTGCTGTTGTTGCTATCATATGTTCATCTCATATCATAGTTTCAAACTGTGGTGATTCAAGAGCTGTCCTCTGTCGTGGTAAAGAACCCATGGCGTTGTCTGTCGATCATAAACCGAATCGAGATGATGAATATGCGAGAATTGAGGCAGCTGGAGGCAAGGTGATACAATGGAATGGTCATCGTGTATTTGGTGTCCTTGCAATGTCTAGGTCCATAGGCGATAGATATCTGAAGCCATGGATTATTCCAGAACCAGAAGTTACATTTCTTCCTCGTGCCAAAAAGGATGAATGTCTGATTCTGGCCAGTGATGGTCTGTGGGATGTAATGACAAACGAAGAAGCATGTGACATAGCTCGGAGACGAATACTTCTCTGGCACAAGAAAAATGGATCGACACTGCCCTCAGTAAGGGGAGAGGAAATTGACCCTGCTGCACAATCAGCTGCCGAATACCTAACAAACCATGCTCTTCAGAAAGGAAGCAAAGATAACATCACTGTGATTGTGGTGGATTTGAAAGCCCAAAGAAAATTTAAGACCAAAACATGA 1671 0.4249 MEEVPSEVAVPLRVADLVCDKSTIAAHMDVSGLKMMTDTSFLYNSITKFSSETVIGSDEDHNNGCNMNGELGITAVTLVPSKQGGEREVPFLDMISQNKGTLVVGDEVLTPETEDDSLSLEGDPTPIIDISCSFSVASSICGDELATYEAIADLGISSSFDIEKSICVVSVVAEAYTADLAESNDMADIMTEPLAVAVTLEEETRIRSAPNPTAVVLHQLPLEKRVNGTVGRSVFELEWTPLWGFTSVCGERPEMEDAVAVVPRFSKIPIQMLIGDRVIDGMDKCFSQQTTHSFGVYDGHGGSQVANYCRDHLHLALAEEIEFVKEGLIVGNTKDDCQDQWKKTFTNCFLKVDAEVGGKAYCEPVAPETVGSTAVVAIICSSHIIVSNCGDSRAVLCRGKEPMALSVDHKPNRDDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVTFLPRAKKDECLILASDGLWDVMTNEEACDIARRRILLWHKKNGSTLPSVRGEEIDPAAQSAAEYLTNHALQKGSKDNITVIVVDLKAQRKFKTKT* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0852 556 Gene3D - 229 556 IPR036457 -
Lan14g0852 556 SMART PP2C_4 232 544 IPR001932 -
Lan14g0852 556 Pfam Protein phosphatase 2C 267 539 IPR001932 -
Lan14g0852 556 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 125 556 - -
Lan14g0852 556 CDD PP2Cc 244 546 IPR001932 -
Lan14g0852 556 PANTHER ALPHABET, ISOFORM E-RELATED 125 556 - -
Lan14g0852 556 ProSiteProfiles PPM-type phosphatase domain profile. 242 546 IPR001932 -
Lan14g0852 556 SUPERFAMILY PP2C-like 234 547 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0852 Lan-Chr14 15200263 15203896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0852 213 556 PP2C-type Phosphatase Gene Family AT1G17550 63.944 4.04e-159 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0852 K14497 - gmx:102662702 791.186