Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0849 ATGAGTTTAAGCACAACCAAGAATGATTCTTCTTCTTCTTCAGAGGTTCATATCCCTGCCGAGATAGATTGGCATATGCTTGATAAGTCCAAGTTTTTCTTCCTAGGCGCCGCCTTATTCTCTGGTGTCTCAGCTGCTCTTTATCCTATGGTTGTGTTGAAGACACGACAACAATGTTCTTCAGCACAATACTCTTGTCTCAACATGTCTTGTGCCATTATGCGCTATGAAGGATTCAGAGGTTTTTACAAAGGTTTTGGAACTTCTTTGATGGGAACAATCCCTGCTCGTGCACTTTACATGGCTTCACTTGAAGTTACCAAGAGTAATGTTGGCACTGCTCTTATTGATCATGGGTTTTCTGATACCACTGCCACTGCTATTGCTAATGCTGCTGCTGGTGTCACTTCTGCTATGGCTGCACAATTGGTTTGGACACCAATTGATGTTGTGAGCCAAAGACTTATGGTCCAAGGCTGCAATAGTACCACCAACACTAAAAATATAGTAACCAATCTTAACTCTGAGAGTTATAGGAATGGTTTTGATGCATTCAGGAAAATTCTATGTGCTGATGGACCAAGAGGGTTCTATAGGGGATTTGGTATTTCAATATTGACTTATGCACCATCCAATGCAGTTTGGTGGACTTCTTACTCTATGGTCCATAGGCTCATTTGGGGTACCTTTGGTAGCTACATTGGTAAGAAAAATGAGGGTAATTTGGTCAATAGAGGGTGTGATTTTAGGCCTGATTCCAAGACAATGGTTGCTGTCCAATGTTTGAGTGCTGTTATGGCAAGTGGGGTATCAGCAATTGTGACAATGCCATTTGACACAATCAAGACAAGGTTGCAAGTATTGGATAGTGAGGAAAATGGGAGAAGAAAGCCTTTAACTTTTGTGCAAACTGTGAAGAATTTGGTGAATGAAGGTGGCTTGCATGCTTGTTACAGAGGATTGGGACCAAGGTGGGTTTCAATGTCAATGTCTGCAACAACCATGATTACAACCTATGAGTTTTTGAAACGAATGTCTACTAAGAGTAATTGA 1053 0.4122 MSLSTTKNDSSSSSEVHIPAEIDWHMLDKSKFFFLGAALFSGVSAALYPMVVLKTRQQCSSAQYSCLNMSCAIMRYEGFRGFYKGFGTSLMGTIPARALYMASLEVTKSNVGTALIDHGFSDTTATAIANAAAGVTSAMAAQLVWTPIDVVSQRLMVQGCNSTTNTKNIVTNLNSESYRNGFDAFRKILCADGPRGFYRGFGISILTYAPSNAVWWTSYSMVHRLIWGTFGSYIGKKNEGNLVNRGCDFRPDSKTMVAVQCLSAVMASGVSAIVTMPFDTIKTRLQVLDSEENGRRKPLTFVQTVKNLVNEGGLHACYRGLGPRWVSMSMSATTMITTYEFLKRMSTKSN* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0849 350 ProSiteProfiles Solute carrier (Solcar) repeat profile. 125 225 IPR018108 -
Lan14g0849 350 ProSiteProfiles Solute carrier (Solcar) repeat profile. 28 110 IPR018108 -
Lan14g0849 350 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 1 349 - -
Lan14g0849 350 SUPERFAMILY Mitochondrial carrier 25 342 IPR023395 -
Lan14g0849 350 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 349 - -
Lan14g0849 350 PRINTS Mitochondrial carrier protein signature 37 50 IPR002067 GO:0055085
Lan14g0849 350 PRINTS Mitochondrial carrier protein signature 198 216 IPR002067 GO:0055085
Lan14g0849 350 PRINTS Mitochondrial carrier protein signature 264 286 IPR002067 GO:0055085
Lan14g0849 350 ProSiteProfiles Solute carrier (Solcar) repeat profile. 255 345 IPR018108 -
Lan14g0849 350 Pfam Mitochondrial carrier protein 126 227 IPR018108 -
Lan14g0849 350 Pfam Mitochondrial carrier protein 257 349 IPR018108 -
Lan14g0849 350 Pfam Mitochondrial carrier protein 41 110 IPR018108 -
Lan14g0849 350 Gene3D Mitochondrial carrier domain 32 350 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0849 Lan-Chr14 15188557 15190383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0849 15 350 Chloroplast and Mitochondria Gene Families AT5G26200 65.774 2.09e-161 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0849 K15121 - gmx:100784202 549.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1097 15 19891406 19893366 Lan14g0849 14 15188557 15190383 LSH
Lan14g0849 14 15188557 15190383 Lan3g1136 3 23688032 23689425 LSH