Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0848 ATGGAAGGTAGTGCCATGCACAATCCGCGTACGGTGGTGGAAGTCTTCACCGATTTCAAATCCCGCAGAACTGCGATCATTAAAGCTCTTACCATTGATGTTGAAGACTTCTTTCACCAATGCGATCCTGACAAAGAGAATCTTTGCCTTTATGGATTTCCTAGTGAACACTGGGAAGTCAATCTGCCTGCTGAGGAGGTGCCTCCAGAGCTTCCAGAGCCAGCTTTGGGTATTAACTTTGCAAGAGATGGGATGCAACAAAAGGATTGGCTGACCTTGGTTGCTGTCCACAGTGATGCATGGTTACTTTCTGTGGCTTTCTATTTTGGTGCTAGGTTTGGATTTGATCAGGCTGATAGGAAACGGCTGTTTACTATGATTAATGATCTTCCAACAATATCTGAGGTTGTCACTGGGTTGGCCAAGAAACAGGGAAAGGAAAAGTCATCAGTTTCTAATCATAGCAGTAACAAACCCAAATCAAATTCTAAGGGAGGTTCTGAATCTCAAGCTAAGTATTCCAGAGCAATGCAATCAGAGGATGAGAATGGTTTTGGAGAGGAAGACGAGGAGGAGCATGAAGAGAGTAAATGTGGGGCATGTGGAGAGAACGATGCAGACGAGCAGTTCTGGATTTTCTGCGACTCCTGTGAGAGGTGGTTCCATGGAAAGTGTGTGAAAATTACGCCTGCAAGAGCTGATCATATCAAACATTACAAATGTCCATCTTGCAGCCACAAGAGATCTCGACCTTTACCATGA 762 0.4462 MEGSAMHNPRTVVEVFTDFKSRRTAIIKALTIDVEDFFHQCDPDKENLCLYGFPSEHWEVNLPAEEVPPELPEPALGINFARDGMQQKDWLTLVAVHSDAWLLSVAFYFGARFGFDQADRKRLFTMINDLPTISEVVTGLAKKQGKEKSSVSNHSSNKPKSNSKGGSESQAKYSRAMQSEDENGFGEEDEEEHEESKCGACGENDADEQFWIFCDSCERWFHGKCVKITPARADHIKHYKCPSCSHKRSRPLP* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0848 253 MobiDBLite consensus disorder prediction 150 177 - -
Lan14g0848 253 SMART PHD_3 197 245 IPR001965 -
Lan14g0848 253 ProSiteProfiles Zinc finger PHD-type profile. 195 247 IPR019787 -
Lan14g0848 253 Pfam PHD-finger 198 246 IPR019787 -
Lan14g0848 253 CDD PHD_AL_plant 198 247 IPR044104 -
Lan14g0848 253 ProSitePatterns Zinc finger PHD-type signature. 198 244 IPR019786 -
Lan14g0848 253 SUPERFAMILY FYVE/PHD zinc finger 187 250 IPR011011 -
Lan14g0848 253 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 187 246 IPR013083 -
Lan14g0848 253 PANTHER PHD FINGER PROTEIN ALFIN-LIKE 3-LIKE ISOFORM X1 4 251 - -
Lan14g0848 253 PANTHER CPG BINDING PROTEIN 4 251 IPR045104 GO:0006355|GO:0042393
Lan14g0848 253 MobiDBLite consensus disorder prediction 144 199 - -
Lan14g0848 253 Pfam Alfin 11 139 IPR021998 GO:0006355|GO:0042393
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0848 Lan-Chr14 15182620 15186424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0848 3 250 Alfin-like Transcription Factor Family AT3G42790 67.470 7.13e-111 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Alfin-like Lan14g0848 Alfin 8.2e-66 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0848 - - mnt:21387296 394.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0848 14 15182620 15186424 Lan3g1135 3 23681461 23686795 LSH