Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0820 ATGGCGTACAACAACCATAATCACCACCTCTCTCAAAACCTCCCACTTCACCATTTCACAGACCAACAACAACAACAACCTTCAACCTCAAACCTCACCACTAAAACTGTCTCTCATCCTAACCAACCCCTCCAAACAGCACCTACTTGGCTCAACAACGCGCTTCTTCGGACTCAATACAACAACAACAACAACAACAACAACAACAACGTTAACAACAACTCTGATTTTCTGAACCTTCACACTACCCCTCCTTCAGACTCTTCTACCCAATGGCTCTCCCGCTCAATCCTCCACCGCAACCACAGCGAAGTCATCAACGACGTCACTGTCGGAGAATCCATCATCGCCGGAGCCGGGAAGGAGAGCGAGGCGGTGGAGGAAGGTGGCGGAGGAGAGGGATTGGTGAACTGGGAAAATGGAAAGTACAAGGCGGAGATTCTAGCTCACCCGCTGTATGAACAGCTTCTGTCGGCACATGTGTCGTGTTTGAGAATCGCTACGCCGGTTGATCAATTGCCAAGGATCGATGCTCAGCTTGGTCAGTCACAGAATATTGTTGCTAAGTATTCCACTTTTGGACATATGCTTGGTCATGATAACAAGGAACTTGATCAGTTCTTGTCACACTATGTTCTGTTGCTCTGTTCCTTCAAAGAACAACTCCAACAACATGTTCGGGTCCATGCAATGGAAGCAGTCATGGCTTGTTGGGAGATCGAGCAATCCTTACAAAGTTTAACAGGAGTTTCACCCGGGGAAGGTACAGGAGCAACAATGTCCGACGACGAAGATAACCAAGTCGATAGTGATGCTGATCTGTTTGATGGTGGTTTGGATGGCCATGATAACATGGGATTTGGCCCTCTTATTCCAACAGAGAATGAGAGGTCCCTCATGGAACGTGTAAGACATGAATTAAAGCATGAATTGAAACAGGGTTATAAGGAGAAAATTGTTGACATAAGAGAGGAAATTTTACGCAAAAGACGAGCGGGGAAACTTCCTGGTGACACTACCTCAGTCCTTAAAGCTTGGTGGCAATCACATTCCAAGTGGCCTTACCCTACCGAGGAAGATAAAGCAAGGTTGGTGCAGGAAACGGGTTTGCAACTGAAGCAGATTAATAATTGGTTCATAAATCAGAGAAAGAGGAACTGGCATAGCAATCCTTCACCTTCTACTGTCTTGAAGAACAAGCGCAAAAGAAGTAATGCAGGTGATAGCAGTGCTGATCATTACATTTAA 1248 0.4591 MAYNNHNHHLSQNLPLHHFTDQQQQQPSTSNLTTKTVSHPNQPLQTAPTWLNNALLRTQYNNNNNNNNNNVNNNSDFLNLHTTPPSDSSTQWLSRSILHRNHSEVINDVTVGESIIAGAGKESEAVEEGGGGEGLVNWENGKYKAEILAHPLYEQLLSAHVSCLRIATPVDQLPRIDAQLGQSQNIVAKYSTFGHMLGHDNKELDQFLSHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDEDNQVDSDADLFDGGLDGHDNMGFGPLIPTENERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSPSTVLKNKRKRSNAGDSSADHYI* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0820 415 MobiDBLite consensus disorder prediction 20 46 - -
Lan14g0820 415 SUPERFAMILY Homeodomain-like 328 391 IPR009057 -
Lan14g0820 415 CDD homeodomain 329 390 IPR001356 GO:0003677
Lan14g0820 415 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 35 405 - -
Lan14g0820 415 ProSiteProfiles 'Homeobox' domain profile. 326 389 IPR001356 GO:0003677
Lan14g0820 415 PANTHER CLASS II KNOTTED-LIKE HOMEOBOX PROTEIN 35 405 - -
Lan14g0820 415 MobiDBLite consensus disorder prediction 383 415 - -
Lan14g0820 415 MobiDBLite consensus disorder prediction 383 400 - -
Lan14g0820 415 SMART HOX_1 328 393 IPR001356 GO:0003677
Lan14g0820 415 Pfam KNOX1 domain 143 183 IPR005540 GO:0003677|GO:0005634
Lan14g0820 415 Pfam KNOX2 domain 199 248 IPR005541 GO:0003677|GO:0005634
Lan14g0820 415 Pfam ELK domain 306 327 IPR005539 GO:0003677
Lan14g0820 415 SMART KNOX1_2 141 185 IPR005540 GO:0003677|GO:0005634
Lan14g0820 415 SMART KNOX2_2 194 249 IPR005541 GO:0003677|GO:0005634
Lan14g0820 415 ProSiteProfiles ELK domain profile. 306 326 IPR005539 GO:0003677
Lan14g0820 415 Pfam Homeobox KN domain 346 385 IPR008422 GO:0003677|GO:0006355
Lan14g0820 415 Gene3D - 327 388 - -
Lan14g0820 415 SMART ELK_2 306 327 IPR005539 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0820 Lan-Chr14 15000889 15004719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0820 1 403 Homeobox Transcription Factor Family AT5G25220 66.819 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Lan14g0820 KNOX2 8.5e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0820 - - lang:109328229 616.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1048 15 19511679 19514780 Lan14g0820 14 15000889 15004719 LSH