Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0817 ATGGGAAAGCCAACGTGGAAGAAGAAAGAAACTGCTTCAACAAATTCAAAGGCTAAACGTAATTCCAAGCCTTTCGATGAAGACACTGCAGTATTCATCAACATGTCACAAGAGCTCAAGGAAGAAGGTAACAAACTCTTTCAAAAGAAAGACCCTGAAGCTGCTATGTTAAAGTACGAAAAAGCCCTCAACCTTCTTCCGAACAATCACATAGATATTGCAAACCTCCGTACATGTATGGCTACTTGTTATATGCAATTAGGTCTCGGTGAGTATCCTCGAGCCGTTAATGAGTGTAATTTAGCGTTACAAGTTTCACCTAGATATACCAAGGCTCTGTTTAAAAGAGCTAAGTGTTATGAAGCGTTGAATCGGTTCAATTTGGCGATTAGGGATGTTCATCTTGTTTTGACTGTGGAACCTAATAATGTTTCGGCATTGGATTTTTGTGAGGGTTTGAGAAAGATGATGGAGGAAAAAGGGATTAGTGTTGATGAAGAAAATGATAATGTTTTGTCTAGTAATGTACAAGTAGAACAGCCTCTTGCTTCTGTTGTGCAGAAAGTGGTAAAAGAGAAAGTAAAGAAAAAGAGAGGTAAGAAAAGTGAGGAAAAGGTTGTTGTTGTTGTTGAGGAAAATGTGAATGTTGTTAAGGATAAAGAAGTTGTTACAGAAACAATTCAGGCAGAAAATTTGATGGTGGAAAGTGTGAAAGAAGAGAAAGCTGTCACTACGACTGTGAAATTGGTATTTGGAGAGGATATCAGGTGGGCGCAGTTGCCAGTGAATTGTAGTATGAAGTTGGTGAGGGATGTAGTTAGGGATCGGTTCCCGGGCTTGAAAGGTGTTCTTGTTAAGTATATGGATGAAGATGGTGATTTGGTTACAATCACTACTACGGATGAACTCAGGCTAGCTGAGTCTTCATGTCATAAGGTGGGCTCGATTCGACTCTATATTATAGAAGCCAGTCCGGAGCAAGAACCTTCTTATGATGGAATAAACAAAGAGCTTGACGTGCGAACAAATAGTAGAAAATCGGGTGATGGTATTGTAAAAGGGGATGTGGAAGAAGGTAAAGGTATAGCAAATAGGATGACTACTGTGGAGGACTGGCTTATTCAGTTTGCCAGGCTGTTCAAGAACCATGTTGGGTTTGATTCTGATTATTATCTAGATATTCATGAGCTTGCAATGAAGCTGTATGCTGAAGCGGTGGAGGATACGGTAACAAGCGATGACGCTGAAGAACTTTTTGAAATTACTGCAGATAAATTTCAAGAGATTGCAGCTTTGGCATTATTCAATTGGGGGAGTGTTCACTTGTCCAGGGCAAGGAACCAAGCTTTCTTTTCGCAGGACGAGTCAAGAGAATCTTCTATTGAGCGCGTTAAAGCTGCATATGAGTGGGCACAAAAGGAGTACAAAATAGCCGAAATGAGATATGAAGAAGCCTTAAAAATTAAACCAGACTTCTATGAAGGATATCTTGCTCTTGGATATCAACAGTTTGAGCAAGCAAGGCTCTGCTGGTATTATGTAATGGCATGCAAGATGGATTTAGAAACTGGCCGTGCTGATGAGATTCTGCGGCTCTATAACAAGGCAGAGGACTGTATGGAGAAAGGCATCTTGATGTGGGAGGAGATTGAGGAGCAGCGATTAAATGGACTATCCAAATCCGATAAATATAAAGAACAGGTTGAGAAAATGGGCTTGGATAATATTTTCGAGGAAATTTCTTCCGATGAAGCTTCAGAGCAGGCTGCAAAGATGAAATCACAAGTATATATTTTATGGGGTACCTTATTGTATGAACGATCTGTAATGGAATATAAGCTAGGCCTGCCAACATGGGAGGAATGTTTAGAGGTTGCGGTCGAAAAATTTGAACTAGCTGGAGCTTCTGCAACAGATATCGCTGTAATTGTAAAAAACCATTGCTCTAATGAAACAGCGCTTGAAGGGTTCAAAATCGACGAGATAGTACAGGCGTGGAATGAGATGTATGATGCTCAAGGGTGGCAGTTTCATGCTCCATCGTTTCGATTGCCAGTGAATTGTAGTATGAAGTTGGTGAGGGATGTAGTTAGGGATCGGTTCCCGGGCTTGAAAGGTGTTCTTGTTAAGTATATGGATGAAGATGGTGATTTGGTTACAATCACTACTACGGATGAACTCAGGCTAGCTGAGTCTTCATGTCATAAGGTGGGCTCGATTCGACTCTATATTATAGAAGCCAGTCCGGAGCAAGAACCTTCTTATGATGGAATAAACAAAGAGCTTGACGTGCGAACAAATAGTAGAAAATCGGGTGATGGTATTGTAAAAGGGGATGTGGAAGAAGGTAAAGGTATAGCAAATAGGATGACTACTGTGGAGGACTGGCTTATTCAGTTTGCCAGGCTGTTCAAGAACCATGTTGGGTTTGATTCTGATTATTATCTAGATATTCATGAGCTTGCAATGAAGCTGTATGCTGAAGCGGTGGAGGATACGGTAACAAGCGATGACGCTGAAGAACTTTTTGAAATTACTGCAGATAAATTTCAAGAGATTGCAGCTTTGGCATTATTCAATTGGGGGAGTGTTCACTTGTCCAGGGCAAGGAACCAAGCTTTCTTTTCGCAGGACGAGTCAAGAGAATCTTCTATTGAGCGCGTTAAAGCTGCATATGAGTGGGCACAAAAGGAGTACAAAATAGCCGAAATGAGATATGAAGAAGCCTTAAAAATTAAACCAGACTTCTATGAAGGATATCTTGCTCTTGGATATCAACAGTTTGAGCAAGCAAGGCTCTGCTGGTATTATGTAATGGCATGCAAGATGGATTTAGAAACTGGCCGTGCTGATGAGATTCTGCGGCTCTATAACAAGGCAGAGGACTGTATGGAGAAAGGCATCTTGATGTGGGAGGAGATTGAGGAGCAGCGATTAAATGGACTATCCAAATCCGATAAATATAAAGAACAGGTTGAGAAAATGGGCTTGGATAATATTTTCGAGGAAATTTCTTCCGATGAAGCTTCAGAGCAGGCTGCAAAGATGAAATCACAAGTATATATTTTATGGGGTACCTTATTGTATGAACGATCTGTAATGGAATATAAGCTAGGCCTGCCAACATGGGAGGAATGTTTAGAGGTTGCGGTCGAAAAATTTGAACTAGCTGGAGCTTCTGCAACAGATATCGCTGTAATTGTAAAAAACCATTGCTCTAATGAAACAGCGCTTGAAGGGTTCAAAATCGACGAGATAGTACAGGCGTGGAATGAGATGTATGATGCTCAAGGGTGGCAGTTTCATGCTCCATCGTTTCGACTTGAACCATTGTTTCGTCGGCGTGTTCCTAAACTCCATGACATCTTGGAGCAATTTTAA 3381 0.4099 MGKPTWKKKETASTNSKAKRNSKPFDEDTAVFINMSQELKEEGNKLFQKKDPEAAMLKYEKALNLLPNNHIDIANLRTCMATCYMQLGLGEYPRAVNECNLALQVSPRYTKALFKRAKCYEALNRFNLAIRDVHLVLTVEPNNVSALDFCEGLRKMMEEKGISVDEENDNVLSSNVQVEQPLASVVQKVVKEKVKKKRGKKSEEKVVVVVEENVNVVKDKEVVTETIQAENLMVESVKEEKAVTTTVKLVFGEDIRWAQLPVNCSMKLVRDVVRDRFPGLKGVLVKYMDEDGDLVTITTTDELRLAESSCHKVGSIRLYIIEASPEQEPSYDGINKELDVRTNSRKSGDGIVKGDVEEGKGIANRMTTVEDWLIQFARLFKNHVGFDSDYYLDIHELAMKLYAEAVEDTVTSDDAEELFEITADKFQEIAALALFNWGSVHLSRARNQAFFSQDESRESSIERVKAAYEWAQKEYKIAEMRYEEALKIKPDFYEGYLALGYQQFEQARLCWYYVMACKMDLETGRADEILRLYNKAEDCMEKGILMWEEIEEQRLNGLSKSDKYKEQVEKMGLDNIFEEISSDEASEQAAKMKSQVYILWGTLLYERSVMEYKLGLPTWEECLEVAVEKFELAGASATDIAVIVKNHCSNETALEGFKIDEIVQAWNEMYDAQGWQFHAPSFRLPVNCSMKLVRDVVRDRFPGLKGVLVKYMDEDGDLVTITTTDELRLAESSCHKVGSIRLYIIEASPEQEPSYDGINKELDVRTNSRKSGDGIVKGDVEEGKGIANRMTTVEDWLIQFARLFKNHVGFDSDYYLDIHELAMKLYAEAVEDTVTSDDAEELFEITADKFQEIAALALFNWGSVHLSRARNQAFFSQDESRESSIERVKAAYEWAQKEYKIAEMRYEEALKIKPDFYEGYLALGYQQFEQARLCWYYVMACKMDLETGRADEILRLYNKAEDCMEKGILMWEEIEEQRLNGLSKSDKYKEQVEKMGLDNIFEEISSDEASEQAAKMKSQVYILWGTLLYERSVMEYKLGLPTWEECLEVAVEKFELAGASATDIAVIVKNHCSNETALEGFKIDEIVQAWNEMYDAQGWQFHAPSFRLEPLFRRRVPKLHDILEQF* 1127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0817 1126 ProSiteProfiles PB1 domain profile. 244 323 IPR000270 GO:0005515
Lan14g0817 1126 SUPERFAMILY TPR-like 418 541 IPR011990 GO:0005515
Lan14g0817 1126 ProSiteProfiles TPR repeat profile. 36 69 IPR019734 GO:0005515
Lan14g0817 1126 ProSiteProfiles PB1 domain profile. 662 747 IPR000270 GO:0005515
Lan14g0817 1126 SUPERFAMILY CAD & PB1 domains 242 335 - -
Lan14g0817 1126 SUPERFAMILY CAD & PB1 domains 684 759 - -
Lan14g0817 1126 SUPERFAMILY TPR-like 29 148 IPR011990 GO:0005515
Lan14g0817 1126 MobiDBLite consensus disorder prediction 1 23 - -
Lan14g0817 1126 PANTHER PROTEIN CLMP1 683 1125 IPR044517 -
Lan14g0817 1126 PANTHER PROTEIN CLMP1 1 684 IPR044517 -
Lan14g0817 1126 SMART tpr_5 74 109 IPR019734 GO:0005515
Lan14g0817 1126 SMART tpr_5 36 69 IPR019734 GO:0005515
Lan14g0817 1126 SMART tpr_5 883 916 IPR019734 GO:0005515
Lan14g0817 1126 SMART tpr_5 459 492 IPR019734 GO:0005515
Lan14g0817 1126 SMART tpr_5 110 143 IPR019734 GO:0005515
Lan14g0817 1126 PANTHER PROTEIN PHOX4 1 684 - -
Lan14g0817 1126 PANTHER PROTEIN PHOX4 683 1125 - -
Lan14g0817 1126 Coils Coil 461 481 - -
Lan14g0817 1126 Pfam PB1 domain 681 744 IPR000270 GO:0005515
Lan14g0817 1126 Pfam PB1 domain 244 320 IPR000270 GO:0005515
Lan14g0817 1126 ProSiteProfiles TPR repeat profile. 110 143 IPR019734 GO:0005515
Lan14g0817 1126 CDD PB1 245 320 - -
Lan14g0817 1126 SUPERFAMILY TPR-like 842 965 IPR011990 GO:0005515
Lan14g0817 1126 Gene3D - 676 747 - -
Lan14g0817 1126 Gene3D - 237 323 - -
Lan14g0817 1126 CDD PB1 685 744 - -
Lan14g0817 1126 Coils Coil 885 905 - -
Lan14g0817 1126 SMART PB1_new 664 747 IPR000270 GO:0005515
Lan14g0817 1126 SMART PB1_new 244 323 IPR000270 GO:0005515
Lan14g0817 1126 Gene3D Tetratricopeptide repeat domain 30 205 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0817 Lan-Chr14 14982595 14986546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0817 25 143 Calmodulin-binding Proteins AT3G25230 28.125 8.64e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0817 - - lang:109326417 2178.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1045 15 19485161 19490410 Lan14g0817 14 14982595 14986546 LSH
Lan6g1781 6 29114035 29116812 Lan14g0817 14 14982595 14986546 PCT
Lan14g0817 14 14982595 14986546 Lan6g1781 6 29114035 29116812 PCT