Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan14g0805 | ATGGTACAAGCAAAGAAGTTCAGAGGTGTAAGGCAGCGCCAGTGGGGCTCTTGGGTGTCAGAAATTCGACACCCTTTACTGAAGAGGAGGGTGTGGCTAGGCACATTTGAGACAGCAGAAGCAGCAGCAAGGGCATATGACCAAGCAGCCATTTTAATGAATGGTCAAAATGCTAAGACAAATTTCCCTACATCAAAGAATGAAGGTGAAGATTCAACCCCTTGTGATGATGAAACTTTCTTGTCTCCCAAGGCACTCTCAGAACTCCTCAGCACAAAGCTTAGGAAGTGTTGCAAAGACCCTTCTCCATCCCTCACTTGTCTGAGGCTAGATGCTGATAATTCTCACATTGGAGTGTGGCAAAAAGGAGCAGGATCACGTTCTGATTCTAATTGGGTCATGAGGGTAGAGCTTGGGAAGAAACAACACAAAGAAAGTGGTTCATCATCTACTATATCAACACCATGCACTGGTAGTGAAAGTGATAATAATAATAATAATAATAATAATAATAATGTTGTTGTTGGAAATGAGGTATCAGAAGAAGATAGAATTGCTATGCAGATGATTGAAGAGCTACTTAATTGGAATTATCCTTGTGGATCAACTTCAAGTACCCTTCAACAGAACCTTCCATGTCAAAGTTCTTAA | 651 | 0.4117 | MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPTSKNEGEDSTPCDDETFLSPKALSELLSTKLRKCCKDPSPSLTCLRLDADNSHIGVWQKGAGSRSDSNWVMRVELGKKQHKESGSSSTISTPCTGSESDNNNNNNNNNNVVVGNEVSEEDRIAMQMIEELLNWNYPCGSTSSTLQQNLPCQSS* | 217 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan14g0805 | 216 | PRINTS | Ethylene responsive element binding protein signature | 7 | 18 | IPR001471 | GO:0003700|GO:0006355 | |
Lan14g0805 | 216 | PRINTS | Ethylene responsive element binding protein signature | 29 | 45 | IPR001471 | GO:0003700|GO:0006355 | |
Lan14g0805 | 216 | MobiDBLite | consensus disorder prediction | 145 | 174 | - | - | |
Lan14g0805 | 216 | PANTHER | SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR | 1 | 203 | - | - | |
Lan14g0805 | 216 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SHINE 2 | 1 | 203 | - | - | |
Lan14g0805 | 216 | Gene3D | AP2/ERF domain | 5 | 65 | IPR036955 | GO:0003700|GO:0006355 | |
Lan14g0805 | 216 | Pfam | AP2 domain | 6 | 55 | IPR001471 | GO:0003700|GO:0006355 | |
Lan14g0805 | 216 | SMART | rav1_2 | 6 | 69 | IPR001471 | GO:0003700|GO:0006355 | |
Lan14g0805 | 216 | SUPERFAMILY | DNA-binding domain | 6 | 65 | IPR016177 | GO:0003677 | |
Lan14g0805 | 216 | CDD | AP2 | 5 | 65 | IPR001471 | GO:0003700|GO:0006355 | |
Lan14g0805 | 216 | ProSiteProfiles | AP2/ERF domain profile. | 6 | 63 | IPR001471 | GO:0003700|GO:0006355 | |
Lan14g0805 | 216 | MobiDBLite | consensus disorder prediction | 140 | 174 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan14g0805 | Lan-Chr14 | 14904810 | 14906371 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan14g0805 | 1 | 199 | AP2-EREBP Transcription Factor Family | AT5G25390 | 62.500 | 6.47e-80 | 235 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Lan14g0805 | AP2 | 2e-12 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan14g0805 | - | - | lang:109326202 | 405.986 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lan14g0805 | 14 | 14904810 | 14906371 | Lan3g1073 | 3 | 23046772 | 23048310 | LSH |