Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0795 ATGTCTCAAACCAACTGGGAAGCTGATAAGATGTTAGATGTTTACATCCATGATTATCTGGTAAAGAGGGATTTGAAGGCTTCTGCTCAAGCTTTTCAAGCTGAAGGAAAAGTATCCTCGGACCCTGTTGCTATTGATGCCCCTGGAGGTTTTTTGTTTGAATGGTGGTCAGTTTTCTGGGACATATTTATTGCCAGGACTAATGAGAAGCACTCCGAGGTTGCTGCGTCTTATATCGAGACACAATTAATTAAGGCAAGGGAGCAACAACAGCAGCAGCAGCAGCAACAACAGCAACAGCAGCAGCCACAACCCCAGCAGTCACAGCATCAACAGCAACATATGCAGATGCAACAGCTCTTGATGCAGAGGCATGCACAGCAGCAACAACAACAGCAGCAACAGCAACAACAACAGCAACAGCATCAGCAACAACAACAACAGCAGCAACATCAGCAGCAACAGCAGCAGCAACAACAACAACAGCAAATCAGAGATAGATCTCATCTCTTAAATGGCAGTACAAATGGGTTAGTTGGAAACTCTGGAACTGCAAATGCACTAGCAACAAAGATGTACGAGGAAAGGATAAAATCACCCCTTCAGAGGGATTCTTTGGATGATGCAGCAATGAAGCAAAGATTTTGTGAAAACATGGGTCAACTGTTGGATCCGAATCATGCCTCAATATTGAAGTCAGCTGCAGCTTCTGGCCAGCCTTCTGGGCAAGTTTTGCATGGTGCTTCTGGTGGAATGTCTCCTCAAGTCCAAGCTCATAGTCAGCAATTGCCGGGGTCTACTCCGGATATAAAGAGTGAGATTAATCCTGTTATAAATCCCAGAGCTGCGGGTCCCGAAGGATCATTGCTAGCAATTCCTGGATCAAATCAAGGTAGCAACAATTTGACTCTGAAGGGGTGGCCTCTGACAGGTTTGGAGCAACTACGCTCTGGTCTACTCCAGCAGCAAAAACCTTTCATTCAGGCTCCTCAGCCTTTTCATCAACTTCAAATGTTGACACCACAACAACAGCTTATGTTTGCCCAACAAAATTTAGCATCACCATCAGCCAGTGATGAAAGTAGAAGACTCAGAATGCTCTTGAATAATAGGAGTATGAGCCTAAATAAGGATGGTCTTTCAAACTCTGTTGGTGATGTAGTATCAAACATCGGATCACCTCTTCAAGGTGGTGCCCCTTCTTTTGGGCGTGGAGATACAGATATGCTAATGAAGTTGAAATTAGCTCAGTTACAGCAGCATCAACAACAGTCAAACACCAATCCACAGCAGCAGCAGCAACTTCAACAGCCTGCTCTTTCAAATCAGCAATCTCAGTCTTCAAATCATAACATGCATCAGCAAGATAAAGTAGGGGGAGGTACTGGCAGTGGCACCGTGGATGGTAGCATGTCAAACTCCTTCAGAGGAAATGATCAGATGGGGAGAAAGAGAAAGCAGCCTGTATCGTCTTCGGGCCCTGCCAATAGTACAGGAACGGCAAATACAGCTGGCCCATCACCAAGTTCCGCACCCTCAACTCCATCAACTCATACGCCTGGAGATGTGATATCAATGCCTGCCTTGCCTCATAGTGGTAGTTCTTCAAAGCCTTTAACAATGTTTGGTACTGACGGTACTGGAACTCTTACATCACCTTCAAACCAGCTGTGGGATGATAAGCATCTTGAATTTCAGGCTGACGTGGATCGCTTTGTGGACGATGGATCTCTTGATGAAAATGTCGAATCTTTTTTATCTCATGATGAAACAGACCCTAGAGATACTGTTGGCCGCTGTATGGATGTAAGCAAAGGTTTCACATTTTCTGAATTAAATTCTGTACGTGCAAGCACGAGCAAAGTTGTTTGTTGCCACTTCTCATCTGATGGGAAATTGCTTGCAAGTGGTGGCCATGACAAAAAGGCTGTTTTATGGCACACAGATTCTCTGAAGCCAAAAGCTACTCTTGAAGAGCATTCGTCTTTGATTACTGATGTCCGTTTCAGTCCAAGCATGCCACGTCTGGCGACATCTTCATTTGACAAAACTGTCAGGGTTTGGGATGTTGACAATCCTGGGTATTCGCTTCGGAACTTCACTGGACATTCGGCAGCTGTTATGTCACTAGATTTTCACCCAATTAAAGATGACCTTATCTGCTCCTGTGATGGTGATGGTGAAATACGATATTGGAGTATAAACAATGGCAATTGTGCTAGAGTCTCCAAGGGTGGCACTATCCAAATGAGATTCCAACCTCGTCTAGGGAGGTACCTTGCTGCAGCTGCAGAGAATGTTGTGTCTATACTTGACGTTGAGACACAAACATGCCAATATTCATTGAAGGGACACACAAAGCCGATACATTCTGTCTGTTGGGACCCATCTGGGGAGTTGTTGGCATCTGTAAGTGAAGACTGTGTCAGGGTTTGGACTCTTGGAACCGGGAGTGAAGGAGAATGTGTACATGAGCTCAGCTGCAATGGCAGCAAGTTTCACTCATGTGTTTTCCACCCAACGTACCCTTCATTGCTGGTTATCGGTTGTTACCAGTCATTGGAGCTATGGAACATGAGTGAGAACAAGACAATGACAATTTCTGCTCATGAAGGTCTTATTGCTGCCTTGTCTGTTTCAACTGTAAATGGTCTGGTTTCTTCTGCCAGTCATGATAAGTTTGTCAAACTCTGGAAATAA 2700 0.4478 MSQTNWEADKMLDVYIHDYLVKRDLKASAQAFQAEGKVSSDPVAIDAPGGFLFEWWSVFWDIFIARTNEKHSEVAASYIETQLIKAREQQQQQQQQQQQQQQPQPQQSQHQQQHMQMQQLLMQRHAQQQQQQQQQQQQQQQHQQQQQQQQHQQQQQQQQQQQQIRDRSHLLNGSTNGLVGNSGTANALATKMYEERIKSPLQRDSLDDAAMKQRFCENMGQLLDPNHASILKSAAASGQPSGQVLHGASGGMSPQVQAHSQQLPGSTPDIKSEINPVINPRAAGPEGSLLAIPGSNQGSNNLTLKGWPLTGLEQLRSGLLQQQKPFIQAPQPFHQLQMLTPQQQLMFAQQNLASPSASDESRRLRMLLNNRSMSLNKDGLSNSVGDVVSNIGSPLQGGAPSFGRGDTDMLMKLKLAQLQQHQQQSNTNPQQQQQLQQPALSNQQSQSSNHNMHQQDKVGGGTGSGTVDGSMSNSFRGNDQMGRKRKQPVSSSGPANSTGTANTAGPSPSSAPSTPSTHTPGDVISMPALPHSGSSSKPLTMFGTDGTGTLTSPSNQLWDDKHLEFQADVDRFVDDGSLDENVESFLSHDETDPRDTVGRCMDVSKGFTFSELNSVRASTSKVVCCHFSSDGKLLASGGHDKKAVLWHTDSLKPKATLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDVDNPGYSLRNFTGHSAAVMSLDFHPIKDDLICSCDGDGEIRYWSINNGNCARVSKGGTIQMRFQPRLGRYLAAAAENVVSILDVETQTCQYSLKGHTKPIHSVCWDPSGELLASVSEDCVRVWTLGTGSEGECVHELSCNGSKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTMTISAHEGLIAALSVSTVNGLVSSASHDKFVKLWK* 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0795 899 MobiDBLite consensus disorder prediction 417 521 - -
Lan14g0795 899 MobiDBLite consensus disorder prediction 234 273 - -
Lan14g0795 899 ProSitePatterns Trp-Asp (WD) repeats signature. 676 690 IPR019775 -
Lan14g0795 899 MobiDBLite consensus disorder prediction 234 297 - -
Lan14g0795 899 ProSiteProfiles Trp-Asp (WD) repeats profile. 782 822 IPR001680 GO:0005515
Lan14g0795 899 Gene3D - 745 899 IPR015943 GO:0005515
Lan14g0795 899 Pfam LisH 10 36 IPR006594 GO:0005515
Lan14g0795 899 CDD WD40 615 899 - -
Lan14g0795 899 Pfam WD domain, G-beta repeat 614 646 IPR001680 GO:0005515
Lan14g0795 899 Pfam WD domain, G-beta repeat 652 689 IPR001680 GO:0005515
Lan14g0795 899 Pfam WD domain, G-beta repeat 777 812 IPR001680 GO:0005515
Lan14g0795 899 Pfam WD domain, G-beta repeat 696 733 IPR001680 GO:0005515
Lan14g0795 899 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 700 738 - -
Lan14g0795 899 PANTHER TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8 1 899 IPR044716 GO:0003714
Lan14g0795 899 ProSiteProfiles Trp-Asp (WD) repeats profile. 615 656 IPR001680 GO:0005515
Lan14g0795 899 SMART Lish 8 40 IPR006594 GO:0005515
Lan14g0795 899 MobiDBLite consensus disorder prediction 417 543 - -
Lan14g0795 899 SMART WD40_4 775 813 IPR001680 GO:0005515
Lan14g0795 899 SMART WD40_4 608 647 IPR001680 GO:0005515
Lan14g0795 899 SMART WD40_4 819 858 IPR001680 GO:0005515
Lan14g0795 899 SMART WD40_4 650 689 IPR001680 GO:0005515
Lan14g0795 899 SMART WD40_4 860 899 IPR001680 GO:0005515
Lan14g0795 899 SMART WD40_4 693 733 IPR001680 GO:0005515
Lan14g0795 899 MobiDBLite consensus disorder prediction 94 124 - -
Lan14g0795 899 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 657 692 - -
Lan14g0795 899 ProSiteProfiles Trp-Asp (WD) repeats profile. 700 742 IPR001680 GO:0005515
Lan14g0795 899 ProSiteProfiles Trp-Asp (WD) repeats profile. 867 899 IPR001680 GO:0005515
Lan14g0795 899 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 867 899 - -
Lan14g0795 899 SUPERFAMILY WD40 repeat-like 610 899 IPR036322 GO:0005515
Lan14g0795 899 ProSiteProfiles LIS1 homology (LisH) motif profile. 8 40 IPR006594 GO:0005515
Lan14g0795 899 MobiDBLite consensus disorder prediction 529 543 - -
Lan14g0795 899 Gene3D - 591 744 IPR015943 GO:0005515
Lan14g0795 899 Coils Coil 117 162 - -
Lan14g0795 899 PANTHER TRANSCRIPTIONAL COREPRESSOR LEUNIG-LIKE PROTEIN 1 899 - -
Lan14g0795 899 ProSiteProfiles Trp-Asp (WD) repeats profile. 657 692 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0795 Lan-Chr14 14822237 14831153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0795 694 898 Miscellaneous Gene Families AT5G08390 25.714 1.13e-12 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR LUG Lan14g0795 WD40 0.0088 CL0186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0795 - - gmx:100816263 1235.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1013 15 19284316 19294085 Lan14g0795 14 14822237 14831153 LSH
Lan14g0795 14 14822237 14831153 Lan3g1050 3 22811692 22821101 LSH
Lan10g0974 10 14761911 14772712 Lan14g0795 14 14822237 14831153 PCT
Lan3g1050 3 22811692 22821101 Lan14g0795 14 14822237 14831153 PCT
Lan14g0795 14 14822237 14831153 Lan10g0974 10 14761911 14772712 PCT
Lan14g0795 14 14822237 14831153 Lan3g1050 3 22811692 22821101 PCT