Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0793 ATGAACAAAGAAAATATAATTAGTGCCAAAGATGATGAGTTTCCACTCAGGGTCACTAGAGCAAGGGCTAAGATCTTGGGATCGAAACCATTTGGAGAAGGGATACCTCCCTACCCAAGTCAATCCTTGAAAAATGATCAGAAAAACAAGCTCCGAGCTAATTCCAAAAGGGTAGCTTCTGATGATATCAACACTTGTAATGTTGCCCCTGCTGGTCTTCAGCACAAGCGGAGGACAATGCTTTCGGATGTAACTAACATCGGTGAAAAATCATATGATAAGTGTTTTAACACATCAAAGCTTCAGGCAAGAGTTCATAAGAAGGACATCACAAAGCTAGCTTCAGGTGTCTCCAACGAAAATTCGTCATCACAAGACGATGTGAGAGCAAAGTTAACTGAAGAATTATCCTCAAAAAGGGTGGTAGAATCACATGACAACATCACTGCAATAACTTTCGACGATAAAGAGCCAGCAGAACATTGCATGTCCAATTGCATAAGAGAAGGTGTTATAGCAGACAACACACTTTCAATGCAAGGCTCTGTGAAATCTGATGAACTCATGAGCTCTCCAAATAAAGAGATAGATATGATTTGTGAGAAACTAGCAGCCTCAGATTGCTTGGCCATTGTGGACATTGATTTGGAATTGAAGTTAAAGGATCCTCTAGTTTGGAGTTCTTACGCCCCTGATATATACAAGAAAACTCGTGTCACAGAGGTTGAAAGGAAACCGTTAACCAATTACATGGAGAAGTTGCAGAAAGACATCAGTCCAAGCATGCGGGCAATTCTGATTGACTGGCTTGTGGAGGTTACTGAAGAATACAAGTTGGTTCCGGACACTCTTTACCTGACTGTGAATCTCATTGATCGCTATCTCTCTACTAGTTTGATTCATAAACAAAGGCTCCAGTTGCTTGGTGTTACTTGCATGCTGATTGCATCAAAATATGAAGAGATTTGTGCTCCTAGAGTGGAAGAGTTTTGCATCATCACAGATAATACATACACAAGAGAAGAGGTATTGAAAATGGAAACTGAGGTTCTAAACCTTTTGAACTTTAAATTATCTGTTCCCACAACTAAAACATTTCTCAGGAGATTCATCCAAGCAGCGCAATCTTCTTACGATGTTCCGCGCGTTGAACTGGAATTCATGGCAAATTATTTTGCAGAGCTTACTCTTGTTGATTACAGCTTCTTGAAGTTTCTACCTTCCCTTGTAGCTGCATCTGCTGTATTCCTTGCCAGATGGACCCTCAACCAGTCAGAACATCCATGGAATCCAACTCTTGAGCACTACACAAACTACAAAGTCTCAGAGCTTAAACCTGTTGTTCTTGCTCTCGAAGATTTGCAACGTAGTACCAAAGGCTGCCCCCTGAATGCGATACGAGAGAAATACAAACAACAGAAGTTCAATTGTGTGGCACAATTGACACCAAAACCGTTGCAGTCCCTCTTCGAGGTTCAACTGTAA 1485 0.4108 MNKENIISAKDDEFPLRVTRARAKILGSKPFGEGIPPYPSQSLKNDQKNKLRANSKRVASDDINTCNVAPAGLQHKRRTMLSDVTNIGEKSYDKCFNTSKLQARVHKKDITKLASGVSNENSSSQDDVRAKLTEELSSKRVVESHDNITAITFDDKEPAEHCMSNCIREGVIADNTLSMQGSVKSDELMSSPNKEIDMICEKLAASDCLAIVDIDLELKLKDPLVWSSYAPDIYKKTRVTEVERKPLTNYMEKLQKDISPSMRAILIDWLVEVTEEYKLVPDTLYLTVNLIDRYLSTSLIHKQRLQLLGVTCMLIASKYEEICAPRVEEFCIITDNTYTREEVLKMETEVLNLLNFKLSVPTTKTFLRRFIQAAQSSYDVPRVELEFMANYFAELTLVDYSFLKFLPSLVAASAVFLARWTLNQSEHPWNPTLEHYTNYKVSELKPVVLALEDLQRSTKGCPLNAIREKYKQQKFNCVAQLTPKPLQSLFEVQL* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0793 494 SMART cyclin_7 365 453 IPR013763 -
Lan14g0793 494 SMART cyclin_7 268 352 IPR013763 -
Lan14g0793 494 Gene3D - 246 359 - -
Lan14g0793 494 SMART Cyclin_C_2 361 484 IPR004367 -
Lan14g0793 494 PANTHER CYCLIN-A2-4 55 490 - -
Lan14g0793 494 SUPERFAMILY Cyclin-like 221 358 IPR036915 -
Lan14g0793 494 MobiDBLite consensus disorder prediction 28 47 - -
Lan14g0793 494 SUPERFAMILY Cyclin-like 360 483 IPR036915 -
Lan14g0793 494 Gene3D - 232 480 - -
Lan14g0793 494 CDD CYCLIN 262 351 IPR013763 -
Lan14g0793 494 Pfam Cyclin, N-terminal domain 232 359 IPR006671 -
Lan14g0793 494 CDD CYCLIN 359 451 IPR013763 -
Lan14g0793 494 PIRSF Cyclin_A_B_D_E 39 492 IPR039361 -
Lan14g0793 494 PANTHER CYCLINS 55 490 IPR039361 -
Lan14g0793 494 Pfam Cyclin, C-terminal domain 361 483 IPR004367 -
Lan14g0793 494 ProSitePatterns Cyclins signature. 263 294 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0793 Lan-Chr14 14804132 14809649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0793 3 490 Core Cell Cycle Gene Families AT5G25380 49.592 8.19e-147 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0793 K06627 - gmx:547780 642.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1009 15 19256537 19262009 Lan14g0793 14 14804132 14809649 LSH
Lan3g1704 3 29576253 29584225 Lan14g0793 14 14804132 14809649 PCT
Lan14g0793 14 14804132 14809649 Lan3g1704 3 29576253 29584225 PCT