Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0787 ATGAACGTGAAATCAACGCATTCTTCATATCGTGATCGAACTCACGAATTCGAGAGCATTGCAGAACGATTGAAGAAATCACGATCAGCTCCTAATTCCACCAATACTACTATTACAACTTCTTCTTCTTCTTCCAGATCCGACGAACACCGATCCGCCATTGCAATTCAATCCGAGTTCAATAAAAGAGCTTCCAAGATTGGCTATGGCATTCATCAAACATCGCAGAAGCTAGCTAAACTTGCAAAGCTGGCGAAGAGAACATCGGTGTTTGATGACCCTACGATGGAAATACAAGAGCTGACAGGTGTTATAAAGCAAGATATAAATGCTCTAAACTCTGCTGTTCTTGATCTTCAGTCACTCTCTAATTCTAGAAATCAGAGTGGTGATTTCTCTGCTGATACTACTACTCATTCAACTACTGTTGTGGATGATCTTAAGACGCGTTTGATGAGCACTACTAAAGAGTTTAAAGATGTTCTCACCATGCGAACCGAGAACTTGAAAGTTCATGAGAATAGAAGGCAATTGTTTTCGTCCTCTGCTTCCAAGGAATCTGCAAATCCTTTTGTTCGTCAACGTCCATTAGCTACAAGGTCGGCTGCTAGTTCTCCCAATGCTCAAGCACCCCCGTGGGCTAATGCTTCAGGCTCACCGTCTTCGTCCCAGTTGTTTCCCAAGAAGCAGGAGGATAGGGAGAGTCAACCGTTGCTGCAACAACAGCAGCAACAACAGGAGATAGTTCCAGTGCAAGATAGTTACATGCAAAGCAGAGCTGAAGCTCTTCATAATGTTGAGTCCACTATTCATGAGCTCAGCAACATCTTTAATCAACTAGCAACACTTGTTTCTCAACAAGGAGAGGTCGCCATCAGGATTGATGAAAACATGGATGATACATTGGCAAACGTAGATGGGGCACAAGGGGCATTGTTGAAGTATCTCAACGGCATATCTTCTAACAGGTGGCTGATGATCAAGATTTTCTTTGTATTAATATTTTTCCTTATGGTTTTCTTATTTTTTGTGGCATAG 1038 0.422 MNVKSTHSSYRDRTHEFESIAERLKKSRSAPNSTNTTITTSSSSSRSDEHRSAIAIQSEFNKRASKIGYGIHQTSQKLAKLAKLAKRTSVFDDPTMEIQELTGVIKQDINALNSAVLDLQSLSNSRNQSGDFSADTTTHSTTVVDDLKTRLMSTTKEFKDVLTMRTENLKVHENRRQLFSSSASKESANPFVRQRPLATRSAASSPNAQAPPWANASGSPSSSQLFPKKQEDRESQPLLQQQQQQQEIVPVQDSYMQSRAEALHNVESTIHELSNIFNQLATLVSQQGEVAIRIDENMDDTLANVDGAQGALLKYLNGISSNRWLMIKIFFVLIFFLMVFLFFVA* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0787 345 SUPERFAMILY t-snare proteins 58 308 IPR010989 GO:0016020|GO:0016192
Lan14g0787 345 ProSitePatterns Syntaxin / epimorphin family signature. 259 298 IPR006012 GO:0005484|GO:0006886|GO:0016020
Lan14g0787 345 MobiDBLite consensus disorder prediction 173 244 - -
Lan14g0787 345 PANTHER SYNTAXIN-32-LIKE 2 344 - -
Lan14g0787 345 MobiDBLite consensus disorder prediction 23 51 - -
Lan14g0787 345 CDD SNARE_syntaxin5 256 334 - -
Lan14g0787 345 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 6 26 IPR021538 -
Lan14g0787 345 MobiDBLite consensus disorder prediction 198 226 - -
Lan14g0787 345 MobiDBLite consensus disorder prediction 26 51 - -
Lan14g0787 345 Gene3D - 54 308 - -
Lan14g0787 345 MobiDBLite consensus disorder prediction 175 189 - -
Lan14g0787 345 PANTHER SYNTAXIN 2 344 IPR045242 -
Lan14g0787 345 SMART tSNARE_6 248 315 IPR000727 -
Lan14g0787 345 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 253 315 IPR000727 -
Lan14g0787 345 Pfam SNARE domain 290 341 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0787 Lan-Chr14 14761091 14764578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0787 1 345 SNARE and Associated Proteins AT3G24350 63.957 2.44e-142 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0787 K08490 - gmx:100811494 465.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1005 15 19220940 19222127 Lan14g0787 14 14761091 14764578 LSH