Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0772 ATGGGTCATGTCTTTAGAGATACTGCTAATACTAGAAATCGAAATGGTCAAGCATGCAGCCGAGTTGGTTGCAGTAGCAGAGTAAACTCTCCTAAAGGTTCTCAAACCGGTTCTTCTGAGAAAGGTAAATCTTTGAGGCCTTCGCCCCGGTCCTTTTCTGGTGGCAAGGAAACAAATGGAAGTTCCTCTAGAACTTTCTCAGGGACCAGTAACCCAGGAAAACCAATTCTAAGGCCTCGGAAAACATTATCCTCGCAGTTAGAGGCAGGTTCATCTGAAACAAGTAGCGTACATGATGAACCAGAAACTTCAAATCTTGTCCCTCCACCTGAAAAGAATCAGAGAGGGCTTCAAGCAGAAGTGGAAAATGCAGACTCTGTTGATGTCATGCCGATGGAAGTAGGGAGCTCTAGTGTACCATCTAATACAAGATCTCGGAGAAACTTTCATCCAAAGCCCGGATTGCGTGGTCAAGAAGTTAAAAGCACTGGTTCAGCTACACATACTGGTATCAGTAGGTATGGGTTGAGGAACCTCAAATGCAATTCTATATCTGATGTCATTCCAGCTGGTGGCTGTTCATCATCCGATTCAACTCTTAATAGAAAGAAGGATATGATAAAAAAGAGAAACTGTGAAGGAGAAAGTAGTTCCAGTGCTAGAGGTAAGAACATAAGTGGGCCTTCATTTGAAGGACGGAATGCTGGTTCCAGAAATGGCATATCTATCTCCGATTCAAGAATATCCAGAAATACTCCTCCCCACAGTGACAGGCCAGACAGCAATGTAGCATCAGTTAGGACACGAAGAACAGTGAGCGGTCAAGCCAGAGGAAGGTTTTCCAGCCAAGGAAATGCTAATCCTGTGGCACCCAATGAGACTCATTCAACGATTCCTCCTTCGCCACGTTCTGGTGATCTTAATGCTCCTGGTGTATCTCATCATTCTTCTGTGGAGGCTGCTTTAAGGGTTCCAAGCTCTTATATTATGCCAGGTACTAGCAGTGATGAGTTATATGGTGTTCTCCCAGTGTCTCCTTCAGAATATGGCATCACTCGTTCTCTAATAAATCGAGAGGGATTTCGACATCGCTACAACATGGATGGTATTGCAGAGGTATTATTGGCACTTGAGAGGATTGAACAAGATGTTGAGCTAACAAATGAGCAAATTCTTATGCTGGAGTCCAACTTGTTCCTTATTGGACTAAACTTCAACGATAGGCATAGAGATATGCGGCTGGACATTGATAACATGTCATATGAGGAACTATTAGCTCTGGAAGAGAGGATGGGTACTGTGAGCACGGCTCTAACCGAGGAAGCATTGTCAGAATGTCTAAAGAGAAGTTTCTATCAACCCTCAGATGATGCAGCTGGGAGTTGCAATGAGCATAAGGAGGACACCAAATGCAGCATCTGCCAGGACGAATATTTGGTCGCCGATGAAGTAGGGAGTCTAAAATGCGAGCATAAGTATCATGTGGTTTGCATACAGCAATGGCTGAGACTGAAGAACTGGTGCCCTATTTGCAAAGCACTAGTGGGACCTTCAAATTTATCATCTTTATCCCATTAG 1578 0.4404 MGHVFRDTANTRNRNGQACSRVGCSSRVNSPKGSQTGSSEKGKSLRPSPRSFSGGKETNGSSSRTFSGTSNPGKPILRPRKTLSSQLEAGSSETSSVHDEPETSNLVPPPEKNQRGLQAEVENADSVDVMPMEVGSSSVPSNTRSRRNFHPKPGLRGQEVKSTGSATHTGISRYGLRNLKCNSISDVIPAGGCSSSDSTLNRKKDMIKKRNCEGESSSSARGKNISGPSFEGRNAGSRNGISISDSRISRNTPPHSDRPDSNVASVRTRRTVSGQARGRFSSQGNANPVAPNETHSTIPPSPRSGDLNAPGVSHHSSVEAALRVPSSYIMPGTSSDELYGVLPVSPSEYGITRSLINREGFRHRYNMDGIAEVLLALERIEQDVELTNEQILMLESNLFLIGLNFNDRHRDMRLDIDNMSYEELLALEERMGTVSTALTEEALSECLKRSFYQPSDDAAGSCNEHKEDTKCSICQDEYLVADEVGSLKCEHKYHVVCIQQWLRLKNWCPICKALVGPSNLSSLSH* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0772 525 Coils Coil 370 397 - -
Lan14g0772 525 MobiDBLite consensus disorder prediction 1 168 - -
Lan14g0772 525 MobiDBLite consensus disorder prediction 186 316 - -
Lan14g0772 525 ProSiteProfiles Zinc finger RING-type profile. 471 512 IPR001841 -
Lan14g0772 525 Pfam Ring finger domain 470 512 IPR001841 -
Lan14g0772 525 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 429 516 IPR013083 -
Lan14g0772 525 SUPERFAMILY RING/U-box 465 517 - -
Lan14g0772 525 SMART ring_2 471 511 IPR001841 -
Lan14g0772 525 MobiDBLite consensus disorder prediction 201 216 - -
Lan14g0772 525 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 2 514 IPR045191 GO:0061630
Lan14g0772 525 MobiDBLite consensus disorder prediction 8 72 - -
Lan14g0772 525 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL44-RELATED 2 514 - -
Lan14g0772 525 MobiDBLite consensus disorder prediction 217 303 - -
Lan14g0772 525 MobiDBLite consensus disorder prediction 84 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0772 Lan-Chr14 14621010 14625564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0772 370 512 C3H Transcription Factor Family AT2G15530 44.056 1.08e-34 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0772 - - gmx:100787213 764.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0983 15 19068522 19073529 Lan14g0772 14 14621010 14625564 LSH
Lan14g0772 14 14621010 14625564 Lan3g1468 3 26248685 26252064 LSH