Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0750 ATGGAAAGTGACAAGAAAATCCCTTCTCCGTCGGATGGTAGTGTTCAGAAAGGCAGGGCATTGCATGGGAGGACTAGTGGCCCTACCAGGCGTTCTACGAAAGGACAATGGACAGCAGAAGAGGATGAGATTCTGTGCAAGGCTGTAGAGCGTTTTAAAGGAAAGAATTGGAAAAAAATAGCCGAGTGTTTCAAGGATAGAACTGATGTGCAATGCTTGCATCGGTGGCAGAAAGTCTTAAATCCAGAGCTCGTCAAAGGTCCATGGTCTAAAGAGGAAGATGAAATAATTATTGATTTGGTCAACAAATATGGTCCTAAAAAATGGTCTAGTATCGCACAACATCTACCTGGGCGTATTGGTAAGCAATGTCGAGAAAGGTGGCATAATCATCTTAATCCTTCTATAAACAAGGAAGCATGGACGCAAGACGAGGAGTTGGCTCTAATAGTTGCTCATGAAAAATATGGGAACAGATGGGCAGAACTAACAAAATATTTGCCTGGAAGGTCAGACAATGCTATAAAAAACCACTGGCACAGTTCTGTGAAAAAGAAATTGGATTCTTACAAGGCATCAGGCTTGCTTGCTCGGTTACAATCTGCACCATTTATTGGTAATCCAAATCAACCCATAGCTTCAACTTCTTCAAGGTTGCAGTGTAGTGGCGATGAAAATGGTCCCAGGGGGACTGAAGCAGAGGAAGTTTCACAGTGTAACCAGGAGTCAGCTAATGCTGGTCACTTTCCATCTGCCACTGAAATGAGCAATGTTGTTTTTCGAACTAGAGAGGAATGCAGGCCAAATGAAGAATCTAGTGTAGGAAAGGATTATAGTCCTAGTGAAGCATCCTGTTCAGAGCCGTATTATGTGTCTCTGGATGATGTTGAATTCAATGAGCAGAAATACTCACAAGAACCAGGAAATTTCACAAATGGGGATTGCCAGCTTAATTTATCTGCTTTAGCCAATATTTCCTCATTGGACTTTGTGAGGGAACCCTCAAGGTTGCAAAATGATTGTATAGCTTCAAGTGAAAGCCAGGACATGCTGATATCTAATGATGAATGCTGCCGATTGCTATTTCCAGAGGCAATGGGTGATGATTGCTTTTCCTCTGGAGATAATAAAGGTGTAAATATGGTTGACTTGTCTAGGTGCACTTCATTTAACTTCCAAACATCTTTACCATCTGCTGCTCCATCAGCACCTTCTGCTAGTGATGATAGGTTGTTATATACTGCTGAAGCCAATCAGTTAGTTGGATCTGAGGATCAGCAGTTTATATGTCAGACATCTGCTCCATCAGTACCTTCTGCTGGTGATGGCAGCTTGCTGTTTACTGCTGAAACCAATCAGTTAGTTGGGTATGAGGATCAGCAGTTTGTCTCAAGAGCACAGGACAACTTCATTTATGCCAATGACTTATCCGGTGCTGCTTGTATCAATCAAATAGGTTGTTCAGAAATGCAAGAGCCATCAGATAATGTCGAGGAAACCTCAAAATTGGTCCCTGTAAACAGTTTTGGTTGTGGATCAGAAACTAAACAAACTTGCTATCCAACAGATGAAAAGCCAAACCTGCATACGAAGCAGGAGAACACAGGATCTCTATGTTATGAACCTCCCCGTTTTCCAAGCTTGGATATTCCTTTCTTAAGTTGTGATCTTACACAACCCGGGTGTGATATGCAGCAAGAGTTTAGTCCCCTAGGTATTCGCCAGTTGATGATGTCTTCTATGAACTGTCTATCACCTTTCAGGTTGTGGGACTCACCTTCTCGAAATGATAGTCCAGATGCTTTGTTGAAAAGTGCTGCTAAAACTTTCATAGGTACGCCATCCATATTAAAGAAAAGACATCGAGACCTTTTATCTCCGCTATCAGATAAAAGAATCGACAAGAAACTTGAGATTGACATGACATCAACATTGATAAAAGATTTTTCCCGTTTGGAAGTCATGTTTGATGACATTGAGACTCCGGAAGCAGTTTTTCTTTCTCCATCTTCAATCCGGAAAAAGAACTCTGGTATCTCTGTTGAAGATGATAAAGAAAATTGTGGACAAACTGTTAAAGAGGAACAAATAAAGGAGGAAAAAAAATCTGCAATATTGGATGACAAAAGGTCAGAACTAGATACAGGTGATGGTATTTCTCAGGAGAAGGGTACACAGCGATTTCCTGATGTTAAGTCTGGGATGAAAAATGATGTCAATGTGACTGCTGAGATTGTGCAACAACCTTCTGGAGTTTTGGCTGAACATGATATGAATAACCTATTACTGCATTCTCCTGATCTAGTTGGCTTTAAATCAGACAGTGATCCAAGTTTATCTGCTAGAACTCATAAAAGTCCTTGTTCGAGCATTAAGTCTCCTTATGGGCAGGAAAAACTTAGAGTTGCTGTTGCTAGTTGTGTACATTCTTTCAATTCATCAGCCCCGGGAGAGAATTCGGATGTTCATGCTGGAAAAGATGCTGGTTTTGAAACATGTAGCATATTTGGTGGAACACCTTTTAGGAGAAGTGTTGAATCACCTACAACATGGAAATCACCTTGGCTCTTCAACACTTTTCTTTCTAGCCCCAAGATTGATCCTGAAATTACTATTGAGGATTTTGGGTATTTCATGAGCCCAGGTAATAGGAGTTATGATGCAATCGAATGGATGAAACAGATCAGTCCGATTGCTCGTGAGATTTTGGAAAATGAAACTCCTAAGGCATTACCAAAAGATGAATCTGTAAATGTCCGGGACAGGGACCAGGAAAATAAGGTTCCGCATGATCAGCCTGGGAACCATTGTCAGTTGGCTTCAAATGCTTTGCTAAAGGTGGAGCGACGCATACTTGACTTCAGCGAATGTGAAACACCAGGCAAGGTTGATAACAGCAAATTCTCAACTATAAGCTGTTCAAGCCCTTCTTCTTCTTCGTATTTGTTAAAAGGATGTAGATAG 2964 0.4113 MESDKKIPSPSDGSVQKGRALHGRTSGPTRRSTKGQWTAEEDEILCKAVERFKGKNWKKIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDEIIIDLVNKYGPKKWSSIAQHLPGRIGKQCRERWHNHLNPSINKEAWTQDEELALIVAHEKYGNRWAELTKYLPGRSDNAIKNHWHSSVKKKLDSYKASGLLARLQSAPFIGNPNQPIASTSSRLQCSGDENGPRGTEAEEVSQCNQESANAGHFPSATEMSNVVFRTREECRPNEESSVGKDYSPSEASCSEPYYVSLDDVEFNEQKYSQEPGNFTNGDCQLNLSALANISSLDFVREPSRLQNDCIASSESQDMLISNDECCRLLFPEAMGDDCFSSGDNKGVNMVDLSRCTSFNFQTSLPSAAPSAPSASDDRLLYTAEANQLVGSEDQQFICQTSAPSVPSAGDGSLLFTAETNQLVGYEDQQFVSRAQDNFIYANDLSGAACINQIGCSEMQEPSDNVEETSKLVPVNSFGCGSETKQTCYPTDEKPNLHTKQENTGSLCYEPPRFPSLDIPFLSCDLTQPGCDMQQEFSPLGIRQLMMSSMNCLSPFRLWDSPSRNDSPDALLKSAAKTFIGTPSILKKRHRDLLSPLSDKRIDKKLEIDMTSTLIKDFSRLEVMFDDIETPEAVFLSPSSIRKKNSGISVEDDKENCGQTVKEEQIKEEKKSAILDDKRSELDTGDGISQEKGTQRFPDVKSGMKNDVNVTAEIVQQPSGVLAEHDMNNLLLHSPDLVGFKSDSDPSLSARTHKSPCSSIKSPYGQEKLRVAVASCVHSFNSSAPGENSDVHAGKDAGFETCSIFGGTPFRRSVESPTTWKSPWLFNTFLSSPKIDPEITIEDFGYFMSPGNRSYDAIEWMKQISPIAREILENETPKALPKDESVNVRDRDQENKVPHDQPGNHCQLASNALLKVERRILDFSECETPGKVDNSKFSTISCSSPSSSSYLLKGCR* 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0750 987 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 29 80 IPR017930 -
Lan14g0750 987 PANTHER MYB PROTEIN-RELATED 6 351 - -
Lan14g0750 987 PANTHER MYB PROTEIN-RELATED 347 986 - -
Lan14g0750 987 MobiDBLite consensus disorder prediction 233 249 - -
Lan14g0750 987 MobiDBLite consensus disorder prediction 1 37 - -
Lan14g0750 987 MobiDBLite consensus disorder prediction 712 733 - -
Lan14g0750 987 SUPERFAMILY Homeodomain-like 83 179 IPR009057 -
Lan14g0750 987 ProSiteProfiles Myb-like domain profile. 29 80 IPR001005 -
Lan14g0750 987 Pfam Myb-like DNA-binding domain 34 80 IPR001005 -
Lan14g0750 987 Pfam Myb-like DNA-binding domain 138 180 IPR001005 -
Lan14g0750 987 Pfam Myb-like DNA-binding domain 86 132 IPR001005 -
Lan14g0750 987 Gene3D - 139 199 - -
Lan14g0750 987 CDD SANT 140 180 IPR001005 -
Lan14g0750 987 MobiDBLite consensus disorder prediction 207 249 - -
Lan14g0750 987 CDD SANT 37 80 IPR001005 -
Lan14g0750 987 MobiDBLite consensus disorder prediction 207 224 - -
Lan14g0750 987 SUPERFAMILY Homeodomain-like 35 90 IPR009057 -
Lan14g0750 987 SMART sant 85 134 IPR001005 -
Lan14g0750 987 SMART sant 33 82 IPR001005 -
Lan14g0750 987 SMART sant 137 185 IPR001005 -
Lan14g0750 987 ProSiteProfiles Myb-like domain profile. 81 132 IPR001005 -
Lan14g0750 987 Gene3D - 86 137 - -
Lan14g0750 987 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 137 187 IPR017930 -
Lan14g0750 987 ProSiteProfiles Myb-like domain profile. 133 183 IPR001005 -
Lan14g0750 987 MobiDBLite consensus disorder prediction 911 930 - -
Lan14g0750 987 MobiDBLite consensus disorder prediction 911 935 - -
Lan14g0750 987 CDD SANT 88 132 IPR001005 -
Lan14g0750 987 PANTHER TRANSCRIPTION REPRESSOR MYB5 6 351 - -
Lan14g0750 987 PANTHER TRANSCRIPTION REPRESSOR MYB5 347 986 - -
Lan14g0750 987 Gene3D - 33 85 - -
Lan14g0750 987 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 81 136 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0750 Lan-Chr14 14472927 14480371 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0750 1 987 MYB Transcription Factor Family AT4G32730 44.190 0.0 697
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan14g0750 Myb_DNA-binding 2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0750 - K09420 gmx:100811335 1316.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0750 14 14472927 14480371 Lan3g1503 3 26548931 26555869 LSH
Lan10g1003 10 15275554 15283487 Lan14g0750 14 14472927 14480371 PCT
Lan6g1735 6 28591145 28598390 Lan14g0750 14 14472927 14480371 PCT
Lan14g0750 14 14472927 14480371 Lan10g1003 10 15275554 15283487 PCT
Lan14g0750 14 14472927 14480371 Lan6g1735 6 28591145 28598390 PCT