Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0743 ATGGTTCAAAAAATCGCTCTAGGATGCACCACAGAGGCCACTAGACCAGATTGCATTCAGGCCCTTGTGGTTGAATTCATAGCTACCTTCCTCTTTGTCTTTACTGGCGTTGGTTCTTCCATGGTTGTAGATAAGGTGGGTGGAGATGCACTAGTAGGGTTATTTTTTGTGGCAGTGGCACATGCACTTGTGGTGGCTGTAATGGTTTCTACAGCCCATATCTCCGGCGGCCACATCAACCCCGCCGTCACCCTTGGCCTCCTTGTAGGTGGCCACATCACAGTATTCCGTTCCATCCTTTATTGGATTGATCAATTAGTAGCAGCTGCATTAGCTTCTTATCTGCTTTACTACCTCACAGGTGGACAGACAACTCCAGTTCATACATTGGCAACTGGTGTGGGGTATGGTCAAGGAGTAATATGGGAGATTGTTCTTACATTCTCATTAATGTTCACTGTCTATGGTACAATGGTGGACCCCAAGAAAGGACCTTTAGCAGGGTATGGACCTACACTTGTTGGGTTTGTAGTAGGGGCTAATATCCTTGCTGGTGGTGCATTTTCTGCTGCTTCTATGAACCCTGCAAGATCATTTGGTCCTGCTTTGGTTACTGGCATTTGGACTGATCATTGGGTTTATTGGGTTGGACCCCTTATTGGTGGTGCTCTTGCAGGTTTCATCTATGAGAATTTCTTCATTCATCGTTCTCATGTTCTACTTGGTCAAGATCAAGAAAACTAG 744 0.457 MVQKIALGCTTEATRPDCIQALVVEFIATFLFVFTGVGSSMVVDKVGGDALVGLFFVAVAHALVVAVMVSTAHISGGHINPAVTLGLLVGGHITVFRSILYWIDQLVAAALASYLLYYLTGGQTTPVHTLATGVGYGQGVIWEIVLTFSLMFTVYGTMVDPKKGPLAGYGPTLVGFVVGANILAGGAFSAASMNPARSFGPALVTGIWTDHWVYWVGPLIGGALAGFIYENFFIHRSHVLLGQDQEN* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0743 247 PANTHER AQUAPORIN-8 3 246 IPR034294 -
Lan14g0743 247 TIGRFAM MIP: MIP family channel proteins 25 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan14g0743 247 CDD MIP 20 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan14g0743 247 Pfam Major intrinsic protein 14 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan14g0743 247 PRINTS Major intrinsic protein family signature 20 39 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan14g0743 247 PRINTS Major intrinsic protein family signature 60 84 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan14g0743 247 PRINTS Major intrinsic protein family signature 97 116 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan14g0743 247 PRINTS Major intrinsic protein family signature 142 160 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan14g0743 247 PRINTS Major intrinsic protein family signature 175 197 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan14g0743 247 PRINTS Major intrinsic protein family signature 212 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan14g0743 247 Gene3D Glycerol uptake facilitator protein. 3 242 IPR023271 -
Lan14g0743 247 ProSitePatterns MIP family signature. 78 86 IPR022357 -
Lan14g0743 247 PANTHER AQUAPORIN TIP4-1 3 246 - -
Lan14g0743 247 SUPERFAMILY Aquaporin-like 13 238 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0743 Lan-Chr14 14415549 14417410 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0743 2 246 Major Intrinsic Protein MIP AT2G25810 73.061 2.84e-122 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0743 K09873 - gmx:100811447 410.994