Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0740 ATGACTCATTGGAAAGTGATAGAAAAAAGAAATATAAAAAAGGTCATAGCTTATGAAATTGAATTGCCAAACCAAATAATAATAAGAATGAGTATTGAACCCCAAAATTGTAAGAGTGGTAGCACCATAAACTCAAACTCAAATTCTCCTCCTTCAACACCCAAAAAAGTGAAACGAATTAGAGACTCAAACAAGTACCCTTTATACCGTGGGGTACGTATGCGTAATTGGGGTAAATGGGTCTCTGAAATTCGTGAGCCACGCAAGAAATCACGCATATGGCTAGGCACATTTTCAACACCTGAAATGGCTGCAAGAGCACACGATGTTGCAGCATTAACCATCAAAGGTAGTTCAGCAATTCTCAACTTCCCTAACCTTGTTAACTCTCTTCCACGTCCTGTGTCACGTGCCCCACGTGATGTTCAAGCTGCGGCTGCAAAAGCTGCTCAAATGGACAACCTTGACATACCCAAAACAACAACAACAACAACAACAACGTTGTCTATGTCTTCTTCTTCTTCTTCTTCATTCTCTTCATTGGTTTCAGCAATGGACTTGTGTAATGATGAGTTAAGTGAGATAATAGAGTTGCCGAGGTTGGAAAACAGTGTTGATGAGAAGAGAGAGTTTGTGTTCATGGAAACAACCTTGGTCGATGGTTGGAATATGTATCAGCCACCTTTGTTTGAAGACTTTGATCAGCTTGGAGTCATAGAAAGTAGGTTTGAGAGTTTCGCACGGAATTAA 750 0.4013 MTHWKVIEKRNIKKVIAYEIELPNQIIIRMSIEPQNCKSGSTINSNSNSPPSTPKKVKRIRDSNKYPLYRGVRMRNWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGSSAILNFPNLVNSLPRPVSRAPRDVQAAAAKAAQMDNLDIPKTTTTTTTTLSMSSSSSSSFSSLVSAMDLCNDELSEIIELPRLENSVDEKREFVFMETTLVDGWNMYQPPLFEDFDQLGVIESRFESFARN* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0740 249 CDD AP2 67 127 IPR001471 GO:0003700|GO:0006355
Lan14g0740 249 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE 36 226 - -
Lan14g0740 249 MobiDBLite consensus disorder prediction 38 54 - -
Lan14g0740 249 MobiDBLite consensus disorder prediction 38 59 - -
Lan14g0740 249 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 36 226 - -
Lan14g0740 249 PRINTS Ethylene responsive element binding protein signature 69 80 IPR001471 GO:0003700|GO:0006355
Lan14g0740 249 PRINTS Ethylene responsive element binding protein signature 91 107 IPR001471 GO:0003700|GO:0006355
Lan14g0740 249 ProSiteProfiles AP2/ERF domain profile. 68 125 IPR001471 GO:0003700|GO:0006355
Lan14g0740 249 SUPERFAMILY DNA-binding domain 68 126 IPR016177 GO:0003677
Lan14g0740 249 Gene3D AP2/ERF domain 68 126 IPR036955 GO:0003700|GO:0006355
Lan14g0740 249 Pfam AP2 domain 67 117 IPR001471 GO:0003700|GO:0006355
Lan14g0740 249 SMART rav1_2 68 131 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0740 Lan-Chr14 14395412 14396248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0740 55 228 AP2-EREBP Transcription Factor Family AT5G11590 62.088 2.11e-60 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lan14g0740 AP2 1.9e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0740 K09286 - tcc:18587975 228.409