Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0737 ATGGAAGTACATGCATTTTCACACCCCACCACCACCTTTTGTCCACAACAATTCCCTTCCTCATCCAACAACAATAATAACAACAACAACAACATCAACAACAACATGGCTTCTTCCGACCATTTCGTCGTTGAGGAATTCCTCGACTTCCCCAACGACGATGACCCTTCTCTCTTTTCAGACTCCGTTCAAGGTAACTCCACCCCTCTTAACAGCACCAATTCATCCAATTCCCTCTCCGCCTCCGCCCACACCAATTTCCAGCCGGAAAATGTCGCTGACACCAATTTCTCCGGCCACCTCTCCGTTCCGTATGATGACCTTGCCGAGCTTGAGTGGCTTTCAAATTTTGAAGAGGAATCATTTTCCAACGAGGAGTTACAGAAGCTGCAACTCATATCTGGCATCAAAGCTGCTTCAAATGATGCAGCTTCAGAAAACTGTGAACTCCAGCGTCAACCTAACAACCCAAGCAACCCGGTTTTCGAATCGCATGTATCTGTTCCGGCCAAGGCTCGTAGCAAGAGGACTCGTGGTCCCCCTTGCAACTGGACCTCACGCCTTCTTGTCCTCTCCCCCACCACATCGTCATCCTCCCTTCATCCTGAGGGTCATGTCATCATCCCAACTAAGAAGCCTGCACCCAGGAAGAGAGACTCGGGTGATGGGGGAGAGGGTAGGAAGTGTTTGCATTGCGCCACTGATAAGACTCCTCAATGGCGCACTGGGCCGATGGGGCCGAAAACATTATGCAATGCGTGTGGCGTGAGGTACAAGTCGGGTAGGCTGGTGCCTGAGTACAGGCCTGCAGCAAGCCCGACTTTCGTCCTCACGAAACACTCAAACTCGCACCGTAAGGTGATGGAGCTGAGGCGCCAGAAAGAGATGATGCAAGCCCAACACCAACACTTCATGCAACATCATCAGAACATGAGCATGATGTATGATGTCTCATCCAACGGTGATGATTACTTGATTCATCAACATGTGGGCCCAGATTTCACCCAGATGATCTAG 1017 0.5034 MEVHAFSHPTTTFCPQQFPSSSNNNNNNNNNINNNMASSDHFVVEEFLDFPNDDDPSLFSDSVQGNSTPLNSTNSSNSLSASAHTNFQPENVADTNFSGHLSVPYDDLAELEWLSNFEEESFSNEELQKLQLISGIKAASNDAASENCELQRQPNNPSNPVFESHVSVPAKARSKRTRGPPCNWTSRLLVLSPTTSSSSLHPEGHVIIPTKKPAPRKRDSGDGGEGRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVMELRRQKEMMQAQHQHFMQHHQNMSMMYDVSSNGDDYLIHQHVGPDFTQMI* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0737 338 ProSitePatterns GATA-type zinc finger domain. 229 254 IPR000679 GO:0006355|GO:0043565
Lan14g0737 338 ProSiteProfiles GATA-type zinc finger domain profile. 223 259 IPR000679 GO:0006355|GO:0043565
Lan14g0737 338 SMART GATA_3 223 273 IPR000679 GO:0006355|GO:0043565
Lan14g0737 338 PANTHER GATA TRANSCRIPTION FACTOR 1 338 - -
Lan14g0737 338 MobiDBLite consensus disorder prediction 210 226 - -
Lan14g0737 338 MobiDBLite consensus disorder prediction 9 36 - -
Lan14g0737 338 MobiDBLite consensus disorder prediction 55 83 - -
Lan14g0737 338 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 224 287 - -
Lan14g0737 338 PIRSF Txn_fac_GATA_plant 14 320 IPR016679 GO:0003677|GO:0005634|GO:0045893
Lan14g0737 338 CDD ZnF_GATA 228 275 IPR000679 GO:0006355|GO:0043565
Lan14g0737 338 MobiDBLite consensus disorder prediction 1 36 - -
Lan14g0737 338 PANTHER GATA TRANSCRIPTION FACTOR 1 338 - -
Lan14g0737 338 Pfam GATA zinc finger 229 262 IPR000679 GO:0006355|GO:0043565
Lan14g0737 338 Gene3D - 223 273 IPR013088 GO:0006355|GO:0008270
Lan14g0737 338 MobiDBLite consensus disorder prediction 57 83 - -
Lan14g0737 338 MobiDBLite consensus disorder prediction 194 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0737 Lan-Chr14 14363126 14365117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0737 38 338 C2C2-Gata Transcription Factor Family AT5G25830 52.888 6.86e-98 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Lan14g0737 GATA 3.1e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0737 - - gmx:100776588 342.813
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0945 15 18786221 18787997 Lan14g0737 14 14363126 14365117 LSH