Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0736 ATGATGACATTAAGCTCAAGCTGCAAAGAAGGGAGCAATGTTTTAATGGATAATGGAAAATATGTGAGGTATACACCAGAACAGGTTGAAGCACTTGAGAGGCTTTACCATGAATGCCCTAAACCAAGTTCACTTCGTCGCCAACAGCTTATTAGAGAGTGCCCCATTCTCTCCCATATTGAACCTAAGCAGATCAAGGTTTGGTTCCAGAACCGAAGATGTAGAGAGAAACAGCGGAAGGAAGCGTCACGGTTGCAAAGTGTGAACAGAAAGCTAACAGCAATGAATAAGCTACTGATGGAGGAAAATGACAGATTGCAGAATCAGGTGTCTCAGCTTGTGTATGAAAACAGCTTTTTCCGCCAACACACCACACATAATACAACTCTTGCCACAACAGACACAAGCTGTGAGTCAGTGGTAACAAGTGGTCAGAGACAATTGACACCTCAGCATCCACCAAGGGATGCAAGCCCTGCTGGACTTTTGTCCATTGCAGATGAAACTTTAGCAGAGTTTCTTTCCAAGGCCACTGGAACTGCTGTTGAGTGGGTCCAAATGCCCGGGATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCATGGTTGCCCTGGAGTCGCAGCACGAGCCTGTGGCCTTGTGGGTTTAGAACCTGCCAGGGTTGCTGAAATCCTCAAAGATCGGCTGTCATGGTTTCGTGATTGCCGAACTGTGGATGTTCTAAATTTGATGTCCACTGCAAATGGAGGAACCATTGAACTGATTTACATGCAGTTGTATGCGCCAACAACTTTGGCACCTGGTCGTGACTTCTGGTTGCTTCGCTACACATCTCTTTTAGAAGACGGTAGTCTTGTGGTCTGTGAAAGATCACTTAACAACACTCAAAATGGTCCTTCTATGCCACCAGTGCAGCATTTTATTAGAGCAGACATGATGCCAAGCGGGTATCTGATTAGACCTTGTGAAGGAGGGGGATCTATTATTCATATTGTTGATCATATTGTTTTAGAGCCCTGGAGTGTACCTGAGGTTTTGCGCCCACTTTATGAGTCATCCATGCTTCTAGCACAAAGGAAAACTATGGCGGCATTACGTCATTTGCGGCAAATTTCTCAAGAGGTTTCCCAGCCATGTGTCGCAGGATCGGGAAGAAGGCCTGCAGCTCTACGTGCACTTAGTCAACGTTTGAGCAAGGGCTTCAACGAAGCTGTCAATGGTTTTGCAGATGATGGTTGGTCCATGTTAGAGAGTGATGGCGTTGATGGTATCACTCTACATGTGAATTCATCACCTAGCAAGATGATGGGAGTAAATCTCGGATATAATAATGGATTTCCTTCGGTGACAAGCTCCATACTATGTGCCAAAGCATCCATTTTGTTACAGAATGTACCTCCAGTGATTCTTCTTAGATTCTTGCGGGAGCACCGATCAGAATGGGCAGATAGCCGTATCGATGCTTACTCAGCTGCTGCTATTAAAGCTGGACCTTGTACCTTGCCAGGGCCACAAGCAGGAGGTTTTGGGGGTCAGGTTATTCTTCCATTATCTCACACAATTGAGCATGAAGAGTTCATGGAGGTTATTAAGCTTGAAAACATGGGCTACTATAGGGACGACATGACTATACCTGGTGATGTTTTCCTCTTGCAACTTTGTAGTGGAGTGGATGAGCATGCCGCTGGCACCAGTGCAGAACTCATTTTTGCTCCAATTGATGCATCTTTATCTGATGATCCACCAATTTTACCTTCTGGTTTTCGGATCATACCACTTGATTCTGGCAGAGATGCTGCGAGTCCAAACCGTACACTTGATCTTGCTTCTGCTCTTGATGTTGGAACCATAGGGAACAAAGCAGCTGGTGACAATTCAGGTCATTCCACAAAATCTGTGATGACAATAGCATTTATGTTTGCATGTGAAATCCACCTTCAAGAGAGTATAGCAACTATGGCCCGGCAGTATGTCCGCAATATTATTGCATCTGTTCAAAGGGTTTCATCAGCTCTTTCTCCGTCGCGATTTGGTTCTCATGATGCTTTTCGCTTACCACCTGGCACTCCTGAGGCACAAACACTTGCTCGATGGATTTGTAACAGCTATAGGTTCTACTTAGGGGTAGAACTCCTTAAGTGTGATGGCAATGAGTCCATTCTCAAATTTCTTTGGCATCACTCAGATGCAATTTTATGCTGCTCTTTAAAGGCACTACCTGTTTTCACATTTGCAAATCAAGCTGGACTTGACATGCTAGAAACAACCTTGGTTGCACTCCAAGACATCACCCCGGAAAAGATTTTCGACGAAAATGGAACGAAAACATTGTACTCTGAGTTCCCTCAGATAATGCAACAGGGTTTTATGTGCATTCAAGGTGGTATATGTTTGTCCAGCATGGAAAGGACAGTGTCCTATGAGAGAGCAGTGGCATGGAAAGTACTAAATGAAGAAGAAACAGCTCATTGCATATGTTTCATGTTTATCAATTGGTCTTTTGTTTGA 2517 0.445 MMTLSSSCKEGSNVLMDNGKYVRYTPEQVEALERLYHECPKPSSLRRQQLIRECPILSHIEPKQIKVWFQNRRCREKQRKEASRLQSVNRKLTAMNKLLMEENDRLQNQVSQLVYENSFFRQHTTHNTTLATTDTSCESVVTSGQRQLTPQHPPRDASPAGLLSIADETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCPGVAARACGLVGLEPARVAEILKDRLSWFRDCRTVDVLNLMSTANGGTIELIYMQLYAPTTLAPGRDFWLLRYTSLLEDGSLVVCERSLNNTQNGPSMPPVQHFIRADMMPSGYLIRPCEGGGSIIHIVDHIVLEPWSVPEVLRPLYESSMLLAQRKTMAALRHLRQISQEVSQPCVAGSGRRPAALRALSQRLSKGFNEAVNGFADDGWSMLESDGVDGITLHVNSSPSKMMGVNLGYNNGFPSVTSSILCAKASILLQNVPPVILLRFLREHRSEWADSRIDAYSAAAIKAGPCTLPGPQAGGFGGQVILPLSHTIEHEEFMEVIKLENMGYYRDDMTIPGDVFLLQLCSGVDEHAAGTSAELIFAPIDASLSDDPPILPSGFRIIPLDSGRDAASPNRTLDLASALDVGTIGNKAAGDNSGHSTKSVMTIAFMFACEIHLQESIATMARQYVRNIIASVQRVSSALSPSRFGSHDAFRLPPGTPEAQTLARWICNSYRFYLGVELLKCDGNESILKFLWHHSDAILCCSLKALPVFTFANQAGLDMLETTLVALQDITPEKIFDENGTKTLYSEFPQIMQQGFMCIQGGICLSSMERTVSYERAVAWKVLNEEETAHCICFMFINWSFV* 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0736 838 Gene3D - 199 379 IPR023393 -
Lan14g0736 838 SUPERFAMILY Homeodomain-like 19 82 IPR009057 -
Lan14g0736 838 Pfam MEKHLA domain 697 837 IPR013978 -
Lan14g0736 838 PANTHER CLASS III HD-ZIP PROTEIN CNA1 5 838 - -
Lan14g0736 838 SUPERFAMILY Bet v1-like 164 374 - -
Lan14g0736 838 Coils Coil 85 116 - -
Lan14g0736 838 CDD homeodomain 20 80 IPR001356 GO:0003677
Lan14g0736 838 SMART HOX_1 17 83 IPR001356 GO:0003677
Lan14g0736 838 ProSiteProfiles 'Homeobox' domain profile. 15 79 IPR001356 GO:0003677
Lan14g0736 838 ProSiteProfiles START domain profile. 155 369 IPR002913 GO:0008289
Lan14g0736 838 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 5 838 IPR044830 GO:0003700
Lan14g0736 838 SMART START_1 164 374 IPR002913 GO:0008289
Lan14g0736 838 CDD START_ArGLABRA2_like 159 374 - -
Lan14g0736 838 Gene3D - 12 87 - -
Lan14g0736 838 Pfam Homeodomain 20 78 IPR001356 GO:0003677
Lan14g0736 838 CDD bZIP 72 111 - -
Lan14g0736 838 Pfam START domain 165 373 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0736 Lan-Chr14 14344954 14351356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0736 16 838 Homeobox Transcription Factor Family AT4G32880 77.831 0.0 1340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lan14g0736 START 4.8e-50 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0736 K09338 - gmx:100815727 1534.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0944 15 18748731 18755528 Lan14g0736 14 14344954 14351356 LSH