Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0712 ATGGAGCTCTATGACCATGATTTCTTGGAGGAGTTAATGGCTCTAAGAAGAGAAACATGGCACACTAATCCAACCACAGAACAAAATCAGTTCTTATCTAATAGCTATAGTTTTGATTGTTTTGATCAAAACTCTTTACCTTTTCTCCAAAACAACACTTGTTATGGTCAAGAATTTCCTCAAAGTTACAACAATGACTACAACACCATCAATGAAATCTATGGCTCCTTACTTGAAGAACCATCAGCACCACAAGTTCTTGATTCATATTATGGTACCCTTGATACTCCACTTAATACATCTCCATTTCTTGCTCAAGAAGATTTCTCATTGTCCATGATTGAAGAAGAGGGTAATACAGTTTTGCTTGATGAAGTGGTTCAGAATTTGGAGCTGCAAAACACATGCAAAATGGAGACAACACAATCATCACCAGAAATGCCGGTTTTCAACATGGGATCTGGGCTAGAAAGTAAGCATAGAGCAAAGAAGCTTCAGGGGCAACCTTCAAAAAATTTAATGGCCGAGAGGAGAAGAAGAAAGAGACTAAACGATCGGCTTTCGATGCTAAGGTCAATTGTACCTAAGATAAGTAAGATGGACAGAACATCTATTCTTAGTGACACTATTGATTACATGAAAGAACTTCTAGATAAGATCAACAATTTGCAACAAGGAATAGAAGTAGATGCAAATATGGGAGCCATTTTCAAAGATGTAAAGCCAAATGAAATATTGATTAGAAATTCTCCTAAGTTTGAGGTAGAGAAGAGTTTGGACACCAAGATTGAAATTTGCTGTGCTGGGAAGCAAGGCTTGTTGCTTTCTACATTTAACACCCTTGAAGCATTAGGCCTAGAGATTCAACAATGTGTTATTAGCTGTTTCAATGATTTCTCAATGCAGGCTTCTTGCTCTCAGGAATTGGAGCAAAGGACAATGTTTAGTTCTGAAGATATAAAACAAGCATTATTTAGAAGTGCAGGATATGGAGGAAGATGTTTGTGA 1008 0.371 MELYDHDFLEELMALRRETWHTNPTTEQNQFLSNSYSFDCFDQNSLPFLQNNTCYGQEFPQSYNNDYNTINEIYGSLLEEPSAPQVLDSYYGTLDTPLNTSPFLAQEDFSLSMIEEEGNTVLLDEVVQNLELQNTCKMETTQSSPEMPVFNMGSGLESKHRAKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILSDTIDYMKELLDKINNLQQGIEVDANMGAIFKDVKPNEILIRNSPKFEVEKSLDTKIEICCAGKQGLLLSTFNTLEALGLEIQQCVISCFNDFSMQASCSQELEQRTMFSSEDIKQALFRSAGYGGRCL* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0712 335 PANTHER DNA BINDING PROTEIN 3 335 - -
Lan14g0712 335 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 3 335 - -
Lan14g0712 335 Gene3D - 158 231 IPR036638 GO:0046983
Lan14g0712 335 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 171 228 IPR036638 GO:0046983
Lan14g0712 335 SMART finulus 173 222 IPR011598 GO:0046983
Lan14g0712 335 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 167 216 IPR011598 GO:0046983
Lan14g0712 335 Pfam Helix-loop-helix DNA-binding domain 173 216 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0712 Lan-Chr14 14108335 14110277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0712 159 335 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 66.292 3.18e-69 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan14g0712 HLH 7.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0712 - - gmx:100812578 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0712 14 14108335 14110277 Lan14g0712 14 14108335 14110277 ECH
Lan15g0912 15 18423396 18425149 Lan14g0712 14 14108335 14110277 LSH
Lan14g0712 14 14108335 14110277 Lan3g1533 3 26797408 26799090 LSH