Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0709 ATGGGGAGAGGGAAGATCGTGATAAGGAGGATCGACAATTCGACGAGCAGGCAAGTTACGTTCTCGAAGCGGAGGAGCGGTTTGTTGAAAAAGGCGAAAGAGCTTGCGATCTTGTGTGATGCTGAGGTAGGAGTCGTGATTTTCTCTAGCACTGGTAAACTCCACGAATTCTCCAACACCAGTATGAAATCAGTAATTGATCGTTACAACAAAACCAAAGAGGAGCATCATCCACTTGGGAATTCAACCTCTGAAGTTAAGTTTTGGCAAAGGGAGGCAGCAATGCTTCGGCAACAGTTGCAGGACTTGCAAGAAAGTCACAGGCAAATGATGGGAGAAGAACTGTCAGGATTGACTGTCAAAGAATTACAGACTTTGGAGAACCAACTGGAAATTAGCCTCCGTGGTGTCCGTGTGCAAAAGGACCAACTTTTAATGGACGAAATACAGGATCTAAATCAAAAGGGAAAGCTCATACACCAAGAAAATATGGAGTTGTATAGGAAGGTAAACTTAATTCATCAAGAAAACACAGAACTCCAAAAGAAGGTATATGGAACAAGAGATTGGAATGGAAGAAAACGGAATTCTGTTCTCACAAATGGTCTAAGCATAGAAGCAAATTTGCAGGTTCCCGTGAGTCTCCAGCTAAGCCAGCCACAGCAACAAAACTATGAGGAACCTACAGAAGCTACAAAATTGGGCAGATTGCAACTGCATTGA 723 0.4315 MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELAILCDAEVGVVIFSSTGKLHEFSNTSMKSVIDRYNKTKEEHHPLGNSTSEVKFWQREAAMLRQQLQDLQESHRQMMGEELSGLTVKELQTLENQLEISLRGVRVQKDQLLMDEIQDLNQKGKLIHQENMELYRKVNLIHQENTELQKKVYGTRDWNGRKRNSVLTNGLSIEANLQVPVSLQLSQPQQQNYEEPTEATKLGRLQLH* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0709 240 Gene3D - 13 95 IPR036879 GO:0003677|GO:0046983
Lan14g0709 240 Pfam K-box region 83 170 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lan14g0709 240 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Lan14g0709 240 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Lan14g0709 240 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Lan14g0709 240 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Lan14g0709 240 PANTHER MADS-BOX TRANSCRIPTION FACTOR 23 ISOFORM X1 1 239 - -
Lan14g0709 240 SUPERFAMILY SRF-like 2 89 IPR036879 GO:0003677|GO:0046983
Lan14g0709 240 MobiDBLite consensus disorder prediction 219 240 - -
Lan14g0709 240 ProSiteProfiles K-box domain profile. 86 176 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lan14g0709 240 Coils Coil 86 113 - -
Lan14g0709 240 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 239 - -
Lan14g0709 240 CDD MADS_MEF2_like 2 77 IPR033896 GO:0000977|GO:0045944
Lan14g0709 240 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Lan14g0709 240 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Lan14g0709 240 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0709 Lan-Chr14 14040054 14066693 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0709 1 231 MADS-box Gene Family AT4G37940 59.740 9.34e-91 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Lan14g0709 K-box 1.3e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0709 K09264 - qsu:112026454 370.933