Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0704 ATGTATGACCCTATGAACCAAATCGTTGCAATCGACGACAACAACGACACCTCCGCCACCATCGAATCCACCGAGCCCGTCGCTAACAACCACCACTCTCACATCATTCATTACGAAGACGGTTCTGCCGGCGTAATTGAAGATGTTGCAACCGATAATGGTGGTGTTTATGCTTCTGGTCCTGTTAACATGCCTACTCAAGCTCTCGATGATTCTAGTCAGCTTACTCTCTCGTTTCGTGGCCAAGTTTATGTGTTTGATTCTGTCTCACCTCAAAAGGTTCAAGCAGTGTTGTTACTGTTGGGGGGACGTGAAGCACCTTCGAGTTCACAATGTGGGGAGGTACCGCCTCTAGATCAGAGGGGTGCAATGGAATATCCAAAATGTAGTCAATCACAACGAGCAGCCTCGTTACTTAGATTTCGTCAGAAGAAGAAAGAACGGTGCTTTGATAAGAAAGTTAGATACATTGTTCGTCAAGAAGTTGCACTCAGGATGCAACGTAGTAAGGGTCAATTTACTTCAGCTAAGAAACAAGATGGAGGTAGTGGTTGGGGTGCAGACCAAGAGTCAGTGCAGGATGCTGTTCAATTAGAAACCTCATGCACACATTGTGGCATAAGTTCAAAGTCCACCCCAATGATGCGGAGAGGGCCATCTGGTCCAAGGACACTTTGCAATGCTTGTGGACTCTTTTGGGCAAATAGGGGTACCTTAAGGGACATTTCCAAGAGAAACCAGGAACACTCTCTTGCACCACCTGAGCAGGTTGGTGAGGGTAATAATAACATGAACTGTGGGACTGCTATGCCTGCACATAACAATCTTCTTACTTTCACTGATGATAATAAGTCACCAGCTATGGTTTCTGCTGATCATTGA 882 0.458 MYDPMNQIVAIDDNNDTSATIESTEPVANNHHSHIIHYEDGSAGVIEDVATDNGGVYASGPVNMPTQALDDSSQLTLSFRGQVYVFDSVSPQKVQAVLLLLGGREAPSSSQCGEVPPLDQRGAMEYPKCSQSQRAASLLRFRQKKKERCFDKKVRYIVRQEVALRMQRSKGQFTSAKKQDGGSGWGADQESVQDAVQLETSCTHCGISSKSTPMMRRGPSGPRTLCNACGLFWANRGTLRDISKRNQEHSLAPPEQVGEGNNNMNCGTAMPAHNNLLTFTDDNKSPAMVSADH* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0704 293 ProSiteProfiles Tify domain profile. 68 103 IPR010399 -
Lan14g0704 293 SMART tify_2 68 103 IPR010399 -
Lan14g0704 293 SMART GATA_3 196 249 IPR000679 GO:0006355|GO:0043565
Lan14g0704 293 Pfam tify domain 72 102 IPR010399 -
Lan14g0704 293 ProSitePatterns GATA-type zinc finger domain. 202 229 IPR000679 GO:0006355|GO:0043565
Lan14g0704 293 PANTHER GATA TRANSCRIPTION FACTOR 28 18 270 IPR045280 GO:0006355
Lan14g0704 293 PANTHER GATA TRANSCRIPTION FACTOR 25 18 270 - -
Lan14g0704 293 Pfam GATA zinc finger 202 238 IPR000679 GO:0006355|GO:0043565
Lan14g0704 293 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 199 248 - -
Lan14g0704 293 ProSiteProfiles CCT domain profile. 134 176 IPR010402 GO:0005515
Lan14g0704 293 Gene3D - 193 251 IPR013088 GO:0006355|GO:0008270
Lan14g0704 293 MobiDBLite consensus disorder prediction 169 190 - -
Lan14g0704 293 CDD ZnF_GATA 201 247 IPR000679 GO:0006355|GO:0043565
Lan14g0704 293 Pfam CCT motif 134 176 IPR010402 GO:0005515
Lan14g0704 293 ProSiteProfiles GATA-type zinc finger domain profile. 196 254 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0704 Lan-Chr14 13993708 13997720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0704 36 252 Tify Gene Family AT4G24470 55.605 4.41e-75 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Lan14g0704 CCT 1.1e-14 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0704 - - gmx:100784789 339.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0704 14 13993708 13997720 Lan14g0704 14 13993708 13997720 ECH
Lan14g0704 14 13993708 13997720 Lan3g1541 3 26875667 26881801 LSH