LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan14g0703	ATGCCTCACAGAACTACTTACATTTTCCCGCGTCAATTCCCTGATGAATCTTCCAAACACTTATTAGATCACGAGAACCAAAAACTTTTCAATGCAACTAAATCAGATTATACTTTTCGTGTTCAAAATGACTTTTCAAAGAAAGCGCAATTTCAAACGGAAAACAACGATGACGTCGTTGTATCTTCCGGTAAGAAACACTCCGCCGTGTCGGATACTTTCGCTGCCGGAACCGGCGGCAAGTTCAGGATTACGAAAACCAAGCAAGTTGATCTTTTACGCGACTGGTTAAACGAAAAAAGAGAATACCGCTCCGGTTACCGCCGGATTTCCTCTTCCTCCGAGGAGGAGCGCGGCCTTCTGCATACACCGGAGAAGAGAACCGCCGTCGACTGGCAAGTATCGCTGCCGAGGGTTTCGAGCGAGAGTAGCTATGCAGGGAGCTTGTTTTCTGGAACGACGACGTTGGATGGGAATTTCTCGAGTGACGTTAAGGATGATACGTCGTCGTCTCGTGTTTCCGTCACTGTGAAGGAGGAAGAAGAAGATAAGAGAGAGAGGTTGGCGAAGAAATATGAAGAAAGCTATATACTGCAAATGATGTTTGCGAAAAGAGTTACTTGTTTGGCAAGCCTTGTTACGGAGCCAGTTTTGGGTACTGAGACTTGGGATGCAGAAACCGTTTCTTATCGTCTTTGGCTGAGTGGGTGTTTGTCATATTCGGATAAGATATCGGATGGTTTTTATAACATATTGGGGATGAATCCATATCTGTGGGTGATGTGCAATGAGGTGGAGGAAGGTGGAAGGAACAGAATACCAACTTTGATGGCCCTGAAGGGTGTTGAACCCAGCGAGACCACTATGGAGGTGGTGCTTGTTGATAGACACGGGGACTCTAGGCTGAAGATGCTTCAAGATAAAGCACAAGAGTTGTATTATGCTTCAGAGAACACCTTAGTGTTGGTCGAACAACTTGGAAAACTTGTTGCCATATGTATGGGGGGTACATTCCCAATGGAACAAGGAGATATGCACAAACGGTGGAAGTTGGTTAGTAAGAGGTTGAGGAATTTCCACAAGTGTGTTGTGCTTCCCATTGGTAGCCTCTCTACTGGGCTTTGTAGGCATCGAGCGATTCTCTTCAAGAGATTGGCAGATTACATAGGTTTGCCGTGTCGCATAGCTCGAGGTTGCAAGTATTGTGCTGCAGATCATAGATCTTCTTGCCTAGTCAAGATTAAATATGACAAGCAGCTCTCAAGGGAATATGTAGTCGACCTAGTTGGGGAACCAGGAAATGTCCATGGGCTAGATTCCTCAATTAATGGAGCATATGTTTCTTCGATGCCGTCCCCTTTTCAAATTTCTCATTTAAAAGAATCACAATCACCTTATTTGGATGGTGCAGAATCTTCTCAATCTAAAAGTTCCAATCACAATTCTGTTATTCCGGAAACTCATCTGTGTTCAGAATGCAGACAGAAAGATCAACCAGTTAAAGAAACAGATTTGCCAAATAATCAAAAGGCCCACATTTATGCTTCAGTTGATCAAACCTATGAAGGAACAGAACCACCACTAAATCTTTTTGGCTTGAAAGGGAATGATGAGGAATGCACAGTTCTGGGTTCAATTTTGCCTTCCATCCATGAAGATGTTGTTTCTAAAGCTCTTCATCCAGTGACTGAAGCATCATTAGATGAATATCCCAGGCTTAGTGAAGATTCAGTCGTAGTACAAGAAACGTCCAACACTGAGATCATTGTAACCGGAAGTTCCGTGGTAAAGAGTACCTTCAAGCAATCTATAATCAATTCGTCCTGCCAGTCAGAACTGACACAGGTAGACGAGAGTATTGAAAACCTGTGCTGTTTACCAGCTGGGAGTATTCCAAGATACGTGAATCTTGAACCATCACTTGCAATGGACTGGCTTGAGATATCATGGGATGATTTACGTATTAAAGAGTGTGTTGGTGCTGGCTCATTTGGGACAGTGCATCGTGCTGAATGGCATGGATCAGATGTCGCTGTCAAGGTTTTAACAGTTCAGGATTTCCAAGATGATCAGATGAAGGAGTTTCTAAGAGAGGTAGCAATAATGAAACGTGTTCGGCATCCAAATGTAGTCCTCTTCATGGGTGCAGTTACAAAACGTCCCCATCTATCTATAGTGACAGAGTATTTGCCTAGGGGTAGTTTATTCCGCCTGATACATAGGCCAGCATCTGGTGAAATTCTGGATCATAGGAGAAGATTGCGAATGGCTTTAGATGTGGCTAAAGGGATCAATTATCTCCATTGTCTTAAACCTCCAATCGTGCACTGGGATCTAAAATCACCAAACTTGTTAGTGGACAAAAATTGGACTGTTAAGGTTTGTGATTTTGGATTGTCCAGATTTAAGGCAGATACTTTCATACCATCAAAATCTGTCGCGGGAACACCTGAGTGGATGGCTCCGGAGTTTCTTCGGGGAGAACCTACAAATGAGAAATCTGATGTCTACAGTTTTGGAGTTATCCTGTGGGAACTTGTGACCATGCAACAACCATGGAGTGGACTTATCCCTGCCCAGGTGGTTGGAGCTGTTGCCTTTCAAAATCGGAAGCTTGCTGTTCCTCAAAACATCTCCCCAGCATTGGCCTCCCTCATGGAATCTTGTTGGGCTGATGACCCAAGTCAACGCCCATCTTTTGCTAGCATAGTTGACTCACTAAAGAAGCTGCTGAAGTCTCCAGCAGAGAAGATTAAAATGGGTGAGACATAA	2772	0.4387	MPHRTTYIFPRQFPDESSKHLLDHENQKLFNATKSDYTFRVQNDFSKKAQFQTENNDDVVVSSGKKHSAVSDTFAAGTGGKFRITKTKQVDLLRDWLNEKREYRSGYRRISSSSEEERGLLHTPEKRTAVDWQVSLPRVSSESSYAGSLFSGTTTLDGNFSSDVKDDTSSSRVSVTVKEEEEDKRERLAKKYEESYILQMMFAKRVTCLASLVTEPVLGTETWDAETVSYRLWLSGCLSYSDKISDGFYNILGMNPYLWVMCNEVEEGGRNRIPTLMALKGVEPSETTMEVVLVDRHGDSRLKMLQDKAQELYYASENTLVLVEQLGKLVAICMGGTFPMEQGDMHKRWKLVSKRLRNFHKCVVLPIGSLSTGLCRHRAILFKRLADYIGLPCRIARGCKYCAADHRSSCLVKIKYDKQLSREYVVDLVGEPGNVHGLDSSINGAYVSSMPSPFQISHLKESQSPYLDGAESSQSKSSNHNSVIPETHLCSECRQKDQPVKETDLPNNQKAHIYASVDQTYEGTEPPLNLFGLKGNDEECTVLGSILPSIHEDVVSKALHPVTEASLDEYPRLSEDSVVVQETSNTEIIVTGSSVVKSTFKQSIINSSCQSELTQVDESIENLCCLPAGSIPRYVNLEPSLAMDWLEISWDDLRIKECVGAGSFGTVHRAEWHGSDVAVKVLTVQDFQDDQMKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLFRLIHRPASGEILDHRRRLRMALDVAKGINYLHCLKPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKADTFIPSKSVAGTPEWMAPEFLRGEPTNEKSDVYSFGVILWELVTMQQPWSGLIPAQVVGAVAFQNRKLAVPQNISPALASLMESCWADDPSQRPSFASIVDSLKKLLKSPAEKIKMGET*	924

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan14g0703	923	PANTHER	SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED	168	921	-	-
	Lan14g0703	923	SUPERFAMILY	Protein kinase-like (PK-like)	631	906	IPR011009	-
	Lan14g0703	923	PANTHER	SERINE/THREONINE-PROTEIN KINASE CTR1-LIKE ISOFORM X1	168	921	-	-
	Lan14g0703	923	CDD	STKc_MAP3K-like	659	907	-	-
	Lan14g0703	923	Gene3D	Transferase(Phosphotransferase) domain 1	732	920	-	-
	Lan14g0703	923	Pfam	Ethylene-responsive protein kinase Le-CTR1	225	435	-	-
	Lan14g0703	923	Gene3D	Phosphorylase Kinase; domain 1	646	730	-	-
	Lan14g0703	923	PRINTS	Tyrosine kinase catalytic domain signature	727	740	IPR001245	GO:0004672\|GO:0006468
	Lan14g0703	923	PRINTS	Tyrosine kinase catalytic domain signature	768	786	IPR001245	GO:0004672\|GO:0006468
	Lan14g0703	923	PRINTS	Tyrosine kinase catalytic domain signature	834	856	IPR001245	GO:0004672\|GO:0006468
	Lan14g0703	923	PRINTS	Tyrosine kinase catalytic domain signature	878	900	IPR001245	GO:0004672\|GO:0006468
	Lan14g0703	923	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	774	786	IPR008271	GO:0004672\|GO:0006468
	Lan14g0703	923	ProSitePatterns	Protein kinases ATP-binding region signature.	659	680	IPR017441	GO:0005524
	Lan14g0703	923	Pfam	Protein tyrosine and serine/threonine kinase	654	907	IPR001245	GO:0004672\|GO:0006468
	Lan14g0703	923	ProSiteProfiles	Protein kinase domain profile.	653	911	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lan14g0703	923	SMART	serkin_6	653	911	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan14g0703	Lan-Chr14	13981268	13988899	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan14g0703	1	921	MAP Kinase Kinase Kinase	AT4G24480	54.592	0.0	998

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL_CTR1-DRK-2	Lan14g0703		PK_Tyr_Ser-Thr	3.5e-65	CL0016

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lan14g0703	14	13981268	13988899	Lan14g0703	14	13981268	13988899	ECH