Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0690 ATGAAAGGAGAATATGTAGAACAAAACCCAAAAACTGAAACACCAAACATGTTCTCAAAGCTTCACCAATCTCAACCCCAACATAACCAATTCCCTAACCACCCTTTCCAACCCTCCGTCGACGACGGCAACACCGCCTTCAAGCCCAACTCCTCCACCGGCGACGGCGCCACCATTGAGGTCGTGCGCCGCCCTAGGGGCCGGCCACCTGGTTCCAAAAACAAGCCCAGACCGCCGGTAATAATAACCCGTGACCCAGAACCAGCGATGAGTCCATACATTCTAGAAGTTTCTGGAGGAAACGATGTTGTTGAAGCCATAGCTAGGTTCAGTAGTCGCAAGAATATTGGATTATGTGTCTTAACTGGTTCTGGAACCGTCGCTAACGTCACGCTCCGTCAACCGTCAACTACTCCTGGAGCTACCGTTACTTTTCACGGCCGTTTGGATATCCTCTCTATTTCCGCTACCTTCATTCCACAGCATCAAGGTTCTTCGGATTCAATGGCGATGCCCAACGGTTTCTCTATCACGCTCGCCGGACCTCAGGGGCAGATCGTCGGAGGAATAGTCTCCGGCGCTTTGATCGCCGCCGGGACGGTGATGGTGATTGCAGCATCGTTCAACAACCCTTCGTATCACAGGCTGATGCCGGAGGAAGAGGGGAGGAATTCGGTGTCAGGGAGTGGGGAAGGACAGTCGCCGCCGGTGTCAGGTGGCGGAGATGGGCAGGGAGAGTCGTGTGGGATGTCTATGTACAGCTGTCATATGCCGTCTGATGTGATTTGGGCTCCAACCGCTAGACCACCACCACCACCACCACCTTATTGA 831 0.5355 MKGEYVEQNPKTETPNMFSKLHQSQPQHNQFPNHPFQPSVDDGNTAFKPNSSTGDGATIEVVRRPRGRPPGSKNKPRPPVIITRDPEPAMSPYILEVSGGNDVVEAIARFSSRKNIGLCVLTGSGTVANVTLRQPSTTPGATVTFHGRLDILSISATFIPQHQGSSDSMAMPNGFSITLAGPQGQIVGGIVSGALIAAGTVMVIAASFNNPSYHRLMPEEEGRNSVSGSGEGQSPPVSGGGDGQGESCGMSMYSCHMPSDVIWAPTARPPPPPPPY* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0690 276 Pfam Plants and Prokaryotes Conserved (PCC) domain 92 210 IPR005175 -
Lan14g0690 276 CDD DUF296 92 208 IPR005175 -
Lan14g0690 276 SUPERFAMILY AF0104/ALDC/Ptd012-like 89 224 - -
Lan14g0690 276 ProSiteProfiles PPC domain profile profile. 87 229 IPR005175 -
Lan14g0690 276 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 11 274 IPR014476 GO:0003680
Lan14g0690 276 PIRSF ESCAROLA 5 266 IPR014476 GO:0003680
Lan14g0690 276 Gene3D - 91 229 - -
Lan14g0690 276 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 11 274 - -
Lan14g0690 276 MobiDBLite consensus disorder prediction 1 86 - -
Lan14g0690 276 MobiDBLite consensus disorder prediction 9 57 - -
Lan14g0690 276 MobiDBLite consensus disorder prediction 214 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0690 Lan-Chr14 13854926 13856118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0690 1 272 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 62.057 1.38e-103 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0690 - - gmx:100788098 376.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0690 14 13854926 13856118 Lan14g0690 14 13854926 13856118 ECH
Lan15g0892 15 18210460 18211555 Lan14g0690 14 13854926 13856118 LSH