Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0682 ATGGAGAAGGTTATGGAATTTGCCGAGCAAGGAAACCAAGTGCAAGAACAAATGGGGGTCCAAGTTCCGCCACCGGAACAAGCCTCACTTGAAAACTCCACTCCGGTGACAAACACCCGCGCCGCCGCTGAGAATGGTGCAGCTTCTGCCACACCTGGTCAAATGGAAAGGCCCATTGTGGGGACAATCAGATACAAAGAATGCCAAAGGAACCACGCCAGTGCTATTGGCGGCTACGCCGTTGATGGTTGCGGCGAGTTTTTGGCGGCAGGAGGAGAAGGCACTCTGGCAGTTACTTGCGCTGCCTGCAACTGCCACCGTAATTTCCACCGCAAGGAGGTTGTTGGCGCGATACTACCACAACCACCGGTGCAACACCACCACAACCAGTTCACCCCACATTACCACCATGTTCCGCCGCCACCTCCTGGTGCTGGTTACCAGCTAGTAGCAGTTCCACCACTGCGCCAACACCACCCCCTTGCTCTCCCCGCCCCATCCGACGGAGGGTACAACCATGAAGAGGTTGATATGTCGAACCCAAACAATGGTGGCAAACCTAAGAAGAGGTTTAGAACAAAATTTACTCAGGAGCAGAAGGATAAGATGGCGGCATTTGCTGAGAAGCTTGGGTGGAAAATTCAGAAACATGATGCTGCTACTGTGGAACAATTCTGTGCTGAAATTGGTGTGAAGACACAAGTTCTGAAGGTTTGGATGCACAACAACAAGCACACCCATTGCAAGAAAACTTAA 756 0.5198 MEKVMEFAEQGNQVQEQMGVQVPPPEQASLENSTPVTNTRAAAENGAASATPGQMERPIVGTIRYKECQRNHASAIGGYAVDGCGEFLAAGGEGTLAVTCAACNCHRNFHRKEVVGAILPQPPVQHHHNQFTPHYHHVPPPPPGAGYQLVAVPPLRQHHPLALPAPSDGGYNHEEVDMSNPNNGGKPKKRFRTKFTQEQKDKMAAFAEKLGWKIQKHDAATVEQFCAEIGVKTQVLKVWMHNNKHTHCKKT* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0682 251 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 65 113 IPR006456 -
Lan14g0682 251 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 47 250 - -
Lan14g0682 251 Pfam ZF-HD protein dimerisation region 63 114 IPR006456 -
Lan14g0682 251 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 1 47 250 - -
Lan14g0682 251 SUPERFAMILY Homeodomain-like 177 248 IPR009057 -
Lan14g0682 251 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 64 114 IPR006456 -
Lan14g0682 251 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 188 244 IPR006455 -
Lan14g0682 251 MobiDBLite consensus disorder prediction 1 53 - -
Lan14g0682 251 Gene3D - 174 249 - -
Lan14g0682 251 MobiDBLite consensus disorder prediction 10 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0682 Lan-Chr14 13757612 13758628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0682 63 246 ZF-HD Transcription Factor Family AT4G24660 50.802 9.13e-57 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lan14g0682 ZF-HD_dimer 2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0682 - - jre:108982030 257.684
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0682 14 13757612 13758628 Lan14g0682 14 13757612 13758628 ECH
Lan15g0882 15 18103854 18104750 Lan14g0682 14 13757612 13758628 LSH
Lan9g1129 9 18654297 18655459 Lan14g0682 14 13757612 13758628 PCT
Lan14g0682 14 13757612 13758628 Lan9g1129 9 18654297 18655459 PCT