Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0678 ATGAGGAAGAAAAGGAAAGGAAGTGAGGCTGATGCATCATCGGATCTGCCCGATATTGTGCGTTCGAATCATGGTTCTACTACATCGTCAAAATTGAAATCTCATTACTCGCTGGAGGATTGTTTGAGGTTGAAGAAGAGGTGTAAAGAAGATGCTGACACTGAGCTGACCGGTTCCTATAAAAGTAGACTTGCAGGCATTGTCACTGCTCCACTTTGTGGGACATCGTCCTTGAACACACCCAAAAGAGGTATCAAGAGAAATATAGGTTGCATTGAAGTGGCTACACAGACGGGCAGGAAGAAGAAGATCGAGGATGATTATGTTTCTGGTGAAACAATTGGGCAAGGCAAATTTGGGTCTGTTTTGTTGTGTCGGTCCAGGGTTAGCGGAGCAGAATGTGCATGTAAGACTCTGAAGAAAGGGGAGGAGACAGTTCACAGAGAGGTGGAGATAATGCAGCATCTGTCTGGGCATTCTGGGGTTGTGACACTGCAAGCAGTGTATGAAGAAGCAGAGTGTTTTCATCTTGTGATGGAATTGTGCTCTGGGGGACGACTGATCGATCAAATGGTTAAGGAAGGTCCATATTCTGAACAGCGGGCTGCTAATGTACTCAAGGAAGTGATGTTGGTCATCAAGTATTGTCATGACATGGGAGTTGTGCACAGAGATATCAAACCTGAGAATATTCTGCTCACGGCATCAGGAAAAATAAAGCTGGCAGATTTTGGCCTGGCCATGAGAATTTCTGAAGGTCAGAACCTGACTGGTTTGGCTGGAAGCCCTGCATATGTTGCCCCAGAAGTATTGTCGGGCAGATACTCTGAAAAGGTGGATATATGGAGCGCTGGAGTGCTCCTGCATGCTATGTTGGTTGGTGGTCTTCCATTTCAAGGAGATTCATTGGACGCAGTTTTTGAGGCTATTAAGAATGTCAAGTTAGATTTCCAAACAGGGATGTGGGAATCAATTTCTAAACCTGCACGGGACCTTGTTGGGAGAATGCTATCACGGGATGTTTCAACAAGGATTTCAGCCGATGAAGTACTTAGGCATCCTTGGATACTGTTCTACACAGCGCGTACATTGGGTACGCTGCCCATCAGAACAAAATTGAAGCACCAAAACAGTGCCACTTGTAGCAGACAAATTTTTGCTACACCCGAGTCTAGGTTAGGAGGAAGCAGGGTAGATGACAATGGCTCCATCAGCAAGGTTTCATCCTCTGAAAGTTGCAATTCAGATGATGAGGAGGATGAATGTGTGTCGATCGATGCCCTCGCCACAGCAATTTCACATGTGAGGATATCCGAACCAAAGAGAAGCAGGTTGTGTAGTCCCACAGGTCCAATAATAGTTCAGCAAGGTTCATCTAACATGAAGGCTAACAATCTCTGTAAAGCATTTTGA 1413 0.4536 MRKKRKGSEADASSDLPDIVRSNHGSTTSSKLKSHYSLEDCLRLKKRCKEDADTELTGSYKSRLAGIVTAPLCGTSSLNTPKRGIKRNIGCIEVATQTGRKKKIEDDYVSGETIGQGKFGSVLLCRSRVSGAECACKTLKKGEETVHREVEIMQHLSGHSGVVTLQAVYEEAECFHLVMELCSGGRLIDQMVKEGPYSEQRAANVLKEVMLVIKYCHDMGVVHRDIKPENILLTASGKIKLADFGLAMRISEGQNLTGLAGSPAYVAPEVLSGRYSEKVDIWSAGVLLHAMLVGGLPFQGDSLDAVFEAIKNVKLDFQTGMWESISKPARDLVGRMLSRDVSTRISADEVLRHPWILFYTARTLGTLPIRTKLKHQNSATCSRQIFATPESRLGGSRVDDNGSISKVSSSESCNSDDEEDECVSIDALATAISHVRISEPKRSRLCSPTGPIIVQQGSSNMKANNLCKAF* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0678 470 SUPERFAMILY Protein kinase-like (PK-like) 99 384 IPR011009 -
Lan14g0678 470 ProSiteProfiles Protein kinase domain profile. 108 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan14g0678 470 PANTHER SERINE/THREONINE-PROTEIN KINASE PEPKR2 25 453 - -
Lan14g0678 470 ProSitePatterns Protein kinases ATP-binding region signature. 114 137 IPR017441 GO:0005524
Lan14g0678 470 MobiDBLite consensus disorder prediction 392 418 - -
Lan14g0678 470 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Lan14g0678 470 MobiDBLite consensus disorder prediction 1 31 - -
Lan14g0678 470 Pfam Protein kinase domain 108 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan14g0678 470 SMART serkin_6 108 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan14g0678 470 Gene3D Transferase(Phosphotransferase) domain 1 99 404 - -
Lan14g0678 470 CDD STKc_CAMK 107 355 - -
Lan14g0678 470 PANTHER SERINE/THREONINE-PROTEIN KINASE 25 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0678 Lan-Chr14 13722459 13726112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0678 108 356 EF-hand Containing Proteins AT1G50700 44.402 6.93e-76 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lan14g0678 Pkinase 5.7e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0678 - - gmx:100812729 750.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g1126 9 18620086 18623481 Lan14g0678 14 13722459 13726112 PCT
Lan14g0678 14 13722459 13726112 Lan9g1126 9 18620086 18623481 PCT