Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan14g0678 | ATGAGGAAGAAAAGGAAAGGAAGTGAGGCTGATGCATCATCGGATCTGCCCGATATTGTGCGTTCGAATCATGGTTCTACTACATCGTCAAAATTGAAATCTCATTACTCGCTGGAGGATTGTTTGAGGTTGAAGAAGAGGTGTAAAGAAGATGCTGACACTGAGCTGACCGGTTCCTATAAAAGTAGACTTGCAGGCATTGTCACTGCTCCACTTTGTGGGACATCGTCCTTGAACACACCCAAAAGAGGTATCAAGAGAAATATAGGTTGCATTGAAGTGGCTACACAGACGGGCAGGAAGAAGAAGATCGAGGATGATTATGTTTCTGGTGAAACAATTGGGCAAGGCAAATTTGGGTCTGTTTTGTTGTGTCGGTCCAGGGTTAGCGGAGCAGAATGTGCATGTAAGACTCTGAAGAAAGGGGAGGAGACAGTTCACAGAGAGGTGGAGATAATGCAGCATCTGTCTGGGCATTCTGGGGTTGTGACACTGCAAGCAGTGTATGAAGAAGCAGAGTGTTTTCATCTTGTGATGGAATTGTGCTCTGGGGGACGACTGATCGATCAAATGGTTAAGGAAGGTCCATATTCTGAACAGCGGGCTGCTAATGTACTCAAGGAAGTGATGTTGGTCATCAAGTATTGTCATGACATGGGAGTTGTGCACAGAGATATCAAACCTGAGAATATTCTGCTCACGGCATCAGGAAAAATAAAGCTGGCAGATTTTGGCCTGGCCATGAGAATTTCTGAAGGTCAGAACCTGACTGGTTTGGCTGGAAGCCCTGCATATGTTGCCCCAGAAGTATTGTCGGGCAGATACTCTGAAAAGGTGGATATATGGAGCGCTGGAGTGCTCCTGCATGCTATGTTGGTTGGTGGTCTTCCATTTCAAGGAGATTCATTGGACGCAGTTTTTGAGGCTATTAAGAATGTCAAGTTAGATTTCCAAACAGGGATGTGGGAATCAATTTCTAAACCTGCACGGGACCTTGTTGGGAGAATGCTATCACGGGATGTTTCAACAAGGATTTCAGCCGATGAAGTACTTAGGCATCCTTGGATACTGTTCTACACAGCGCGTACATTGGGTACGCTGCCCATCAGAACAAAATTGAAGCACCAAAACAGTGCCACTTGTAGCAGACAAATTTTTGCTACACCCGAGTCTAGGTTAGGAGGAAGCAGGGTAGATGACAATGGCTCCATCAGCAAGGTTTCATCCTCTGAAAGTTGCAATTCAGATGATGAGGAGGATGAATGTGTGTCGATCGATGCCCTCGCCACAGCAATTTCACATGTGAGGATATCCGAACCAAAGAGAAGCAGGTTGTGTAGTCCCACAGGTCCAATAATAGTTCAGCAAGGTTCATCTAACATGAAGGCTAACAATCTCTGTAAAGCATTTTGA | 1413 | 0.4536 | MRKKRKGSEADASSDLPDIVRSNHGSTTSSKLKSHYSLEDCLRLKKRCKEDADTELTGSYKSRLAGIVTAPLCGTSSLNTPKRGIKRNIGCIEVATQTGRKKKIEDDYVSGETIGQGKFGSVLLCRSRVSGAECACKTLKKGEETVHREVEIMQHLSGHSGVVTLQAVYEEAECFHLVMELCSGGRLIDQMVKEGPYSEQRAANVLKEVMLVIKYCHDMGVVHRDIKPENILLTASGKIKLADFGLAMRISEGQNLTGLAGSPAYVAPEVLSGRYSEKVDIWSAGVLLHAMLVGGLPFQGDSLDAVFEAIKNVKLDFQTGMWESISKPARDLVGRMLSRDVSTRISADEVLRHPWILFYTARTLGTLPIRTKLKHQNSATCSRQIFATPESRLGGSRVDDNGSISKVSSSESCNSDDEEDECVSIDALATAISHVRISEPKRSRLCSPTGPIIVQQGSSNMKANNLCKAF* | 471 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan14g0678 | 470 | SUPERFAMILY | Protein kinase-like (PK-like) | 99 | 384 | IPR011009 | - | |
Lan14g0678 | 470 | ProSiteProfiles | Protein kinase domain profile. | 108 | 356 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lan14g0678 | 470 | PANTHER | SERINE/THREONINE-PROTEIN KINASE PEPKR2 | 25 | 453 | - | - | |
Lan14g0678 | 470 | ProSitePatterns | Protein kinases ATP-binding region signature. | 114 | 137 | IPR017441 | GO:0005524 | |
Lan14g0678 | 470 | MobiDBLite | consensus disorder prediction | 392 | 418 | - | - | |
Lan14g0678 | 470 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 221 | 233 | IPR008271 | GO:0004672|GO:0006468 | |
Lan14g0678 | 470 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
Lan14g0678 | 470 | Pfam | Protein kinase domain | 108 | 356 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lan14g0678 | 470 | SMART | serkin_6 | 108 | 356 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lan14g0678 | 470 | Gene3D | Transferase(Phosphotransferase) domain 1 | 99 | 404 | - | - | |
Lan14g0678 | 470 | CDD | STKc_CAMK | 107 | 355 | - | - | |
Lan14g0678 | 470 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 25 | 453 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan14g0678 | Lan-Chr14 | 13722459 | 13726112 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan14g0678 | 108 | 356 | EF-hand Containing Proteins | AT1G50700 | 44.402 | 6.93e-76 | 244 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CDPK | Lan14g0678 | Pkinase | 5.7e-69 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan14g0678 | - | - | gmx:100812729 | 750.74 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lan9g1126 | 9 | 18620086 | 18623481 | Lan14g0678 | 14 | 13722459 | 13726112 | PCT | |
Lan14g0678 | 14 | 13722459 | 13726112 | Lan9g1126 | 9 | 18620086 | 18623481 | PCT |