Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0654 ATGGGAAGGTCTCCATGCTGCGATGAGAATGGCCTTAAGAAAGGACCATGGACTTCTGAAGAAGATCAAAAGCTAATCCAACACATTGAAAAACACGGCCATGGAAGTTGGAGAGCACTTCCTAAGCTAGCTGGTCTTAACAGGTGTGGAAAAAGTTGCAGGCTTAGGTGGACCAACTATTTAAGGCCTGATATCAAGAGGGGAAAGTTTTCACAAGATGAGGAGCAAACAATCCTGCATCTCCATTCCATTCTTGGAAACAAGTGGTCAGCAATTGCAACCAATCTTCCAGGTAGAACCGATAATGAGATCAAGAATTTCTGGAACACTCATTTAAGGAAAAAGTTAATTCAGATGGGTTTTGATCCAATGACTCACCAACCAAGAAATGACCTTGTTTCCACCTTGCCATATTTGCTAGCTTTGGTCAACATGACAGACATCATGGATCATAATCAGTCATTAGATGAACATGCTCTAAGGTTACAAGCAGAAGCAGTTCAGCTAGCCAAGTTTCAATACCTTCATTATTTACTACAATCTTCAAATTCCTCAAGTACCAATTCCTATGACCAAAATGTCATCACCAACATGGAAACATCTTTTACTATGTTAAACTCAATGAAAGAGAATCAAGTTATGGAGTTGCCACAACTGTGTAATGATAATCCTGCACCCTCATTTCATCAAGGGATTATTGCTGCTTCTAGCTCCCAACCACTCTACCACCAAAGCAATATGGTATCTGACTTTTTAGACCCACAAGTCTCTTTCAATTCTCAATCATGTTTGAATAATGAGCAGGGCCAAGGTACTAACTATGCAATCATAAGTCAAGGGGATCATACTATATCTGATCATGACTCATCTTGGATTATTCCATCTCCTGCACCATCATCTATTAATCCTCCAAATGCAACTAGTAATGTTCCTGGAGATGCTAGTAGCAGAACTTCTAGCTATGGGGGTGGAATCTCATCTTATTGGCCTGAGTTATTTTTTGAGGACCCCATTATCATGCATGAGCTATCTTAG 1035 0.401 MGRSPCCDENGLKKGPWTSEEDQKLIQHIEKHGHGSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFSQDEEQTILHLHSILGNKWSAIATNLPGRTDNEIKNFWNTHLRKKLIQMGFDPMTHQPRNDLVSTLPYLLALVNMTDIMDHNQSLDEHALRLQAEAVQLAKFQYLHYLLQSSNSSSTNSYDQNVITNMETSFTMLNSMKENQVMELPQLCNDNPAPSFHQGIIAASSSQPLYHQSNMVSDFLDPQVSFNSQSCLNNEQGQGTNYAIISQGDHTISDHDSSWIIPSPAPSSINPPNATSNVPGDASSRTSSYGGGISSYWPELFFEDPIIMHELS* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0654 344 SMART sant 13 63 IPR001005 -
Lan14g0654 344 SMART sant 66 114 IPR001005 -
Lan14g0654 344 CDD SANT 69 112 IPR001005 -
Lan14g0654 344 Gene3D - 69 116 - -
Lan14g0654 344 CDD SANT 16 61 IPR001005 -
Lan14g0654 344 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 330 - -
Lan14g0654 344 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lan14g0654 344 Gene3D - 11 67 - -
Lan14g0654 344 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lan14g0654 344 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lan14g0654 344 MobiDBLite consensus disorder prediction 287 317 - -
Lan14g0654 344 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lan14g0654 344 PANTHER TRANSCRIPTION FACTOR MYB39-LIKE 1 330 - -
Lan14g0654 344 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lan14g0654 344 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Lan14g0654 344 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0654 Lan-Chr14 13509343 13511167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0654 1 339 MYB Transcription Factor Family AT1G34670 52.703 2.89e-113 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan14g0654 Myb_DNA-binding 3.7e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0654 K09422 - gmx:100782792 489.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0654 14 13509343 13511167 Lan14g0654 14 13509343 13511167 ECH
Lan15g0855 15 17770071 17771726 Lan14g0654 14 13509343 13511167 LSH
Lan14g0654 14 13509343 13511167 Lan3g1564 3 27129684 27131653 LSH