Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0647 ATGACAAACCAGAATGTGGTGGCTCCTAATGATGTGAAGCCTTTGAACTTTAACACCATTTTTGTGATGGCAACTTCCATTTCAAACTCAAATTCGAATCTATTATCAAGTGAAGCAGTGCAGGAACCTCTAGCAATGCTAGGTGGACTTTTGAGTTTGTCTCAGAGGAATTTTATGAAAAGGTTGGAAGGAAATAACAAAGTTCACAATTGGGTTGATTCAATCAGAGCTTCTTCTCCAACTCGTGACAAATCTACTTCAGAAAACCAAGAAAAAAGTGCTTGGAATCTTTATCACCCTTCAGCACTAAACATGTTTGATAAGATAATATCTAACTCAAAGGGAAAGCAGATTGTAACTTTTCTTGACTATGATGGAACTCTCTCACCAATTGTTGCGGATCCAGATAAAGCATATATGACTAGCAAGATGAAAGGGACTCTAAAGGAAATAGCAAGACATTTTCCTACGGCCATCGTGACCGGAAGGTGTAGAGACAAGGTATATAATTTTGTAAGATTGGCAGAAGTTTATTATGCGGGAAGCCATGGCATGGACATAAAGGGGCCACGAAAAAACCAAAGTCCTAAGAAAGGTAATAATAATGGAAAAACAATGCTATTCCAACCTGCAAGTCAATTCATGCCAATGATAAATGAGGTGTATAAGATCTTGCAAGTAAAAACAAAATGTGTCCCTGGGGCTATGGTTGAGAACAACAAATTTTGTTTGTCTGTGCACTTCCGTTGTGTTGACGAAAAGAATTGGGCACTATTGGCTGAGCAAGTTAGATTGGTGCTTAATGGGTACCCAAAACTTAAACTAACCCAAGGGAGAAAAGTCCTAGAGATTCGTCCAACCATTAAATGGGACAAGGGCAAGGCTCTAGAATTCTTGTTACAATCACTAGGATATAACAATTCTGATGAAGTATTTCCAATCTATATCGGTGATGATCGAACGGACGAAGATGCTTTTAAGGTTTTGCGTAGTAGAGGTCAAGGGATTGGGATTCTTGTTTCTAAATTTCCAAAAGAAACGGATGCTTCCTACACCTTGGAAGATCCATCAGAGGTTGAACAATTTTTGCGGCGATTAGTGGAATGGAAAAGATCAAGTATTGTGACTACCACAAGTGTATAG 1143 0.3876 MTNQNVVAPNDVKPLNFNTIFVMATSISNSNSNLLSSEAVQEPLAMLGGLLSLSQRNFMKRLEGNNKVHNWVDSIRASSPTRDKSTSENQEKSAWNLYHPSALNMFDKIISNSKGKQIVTFLDYDGTLSPIVADPDKAYMTSKMKGTLKEIARHFPTAIVTGRCRDKVYNFVRLAEVYYAGSHGMDIKGPRKNQSPKKGNNNGKTMLFQPASQFMPMINEVYKILQVKTKCVPGAMVENNKFCLSVHFRCVDEKNWALLAEQVRLVLNGYPKLKLTQGRKVLEIRPTIKWDKGKALEFLLQSLGYNNSDEVFPIYIGDDRTDEDAFKVLRSRGQGIGILVSKFPKETDASYTLEDPSEVEQFLRRLVEWKRSSIVTTTSV* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0647 380 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 23 373 IPR044651 GO:0004805|GO:0005992
Lan14g0647 380 SUPERFAMILY HAD-like 121 369 IPR036412 -
Lan14g0647 380 Pfam Trehalose-phosphatase 121 357 IPR003337 GO:0003824|GO:0005992
Lan14g0647 380 TIGRFAM T6PP: trehalose-phosphatase 116 367 IPR003337 GO:0003824|GO:0005992
Lan14g0647 380 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 121 331 IPR006379 -
Lan14g0647 380 CDD HAD_TPP 121 359 - -
Lan14g0647 380 Gene3D - 229 377 IPR023214 -
Lan14g0647 380 Gene3D - 118 218 IPR023214 -
Lan14g0647 380 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 23 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0647 Lan-Chr14 13412721 13415199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0647 114 366 Trehalose Biosynthesis Gene Families AT1G70290 25.556 1.72e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0647 K01087 - gmx:100788641 552.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0846 15 17663489 17666130 Lan14g0647 14 13412721 13415199 LSH
Lan11g0472 11 3585278 3587904 Lan14g0647 14 13412721 13415199 PCT
Lan9g1114 9 18500014 18503282 Lan14g0647 14 13412721 13415199 PCT
Lan14g0647 14 13412721 13415199 Lan11g0472 11 3585278 3587904 PCT
Lan14g0647 14 13412721 13415199 Lan9g1114 9 18500014 18503282 PCT