Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0645 ATGGAATCTATGATGGATTTCTATAGTAACATGTCTCAGTTTCACTCAGATCCATTCAGAGGTGAGTTAATGGAAGTTCTTGAACCTTTTATGAAAAGTACTTCCCCAACTTCAACCCCATTATCCACTTTCTCAAACTCATCTCAACCTTCTACTTCTACTTCTTATTCTCCTTCTCCCAGTTACTTCAATTCCTCTTCTTTTCTCCCTATTCATCAACCAAATGATTGTTCATCCAAAAGCCAAAACTTTATTGGCTTTGGTCAATCAACTTCATCTATTCTTGGCCTCAATCACTTAACCCCATCTCAGATAAATCAGTTTCAGACTCAGATCAACCTTCAGTATATGCAAAAGTTTCAGCACAACACAACCACCCTTAGTTTCCTTAGTCCTAAGCCTATCTCAATGAAGCACATGGGTGCACCACCAATACCCAATAAGCTTTATAGAGGGGTGAGGCAAAGGCATTGGGGAAAGTGGGTTGCTGAGATAAGACTTCCCAAAAATAGAACAAGGCTTTGGCTTGGTACCTTTGATACAGCTGAAGAAGCTGCTTTGGCTTATGACAAAGCTGCTTATAAGCTCAGAGGTGATTTTGCTAGGCTCAACTTTCCAAACCTTAAGCACCAAGGTTCATGTGTTGGTGCTGGGTACAAGGCTCTTCATTCATCCGTTGATGCCAAGCTTCAAGCTATTTGTGAAGGCTTAGCTGATATGCAGAAAAAACAAGGGAATAATAAGACTAAGTCTGAGAAGGTAGCAAAAACCTCTTCTAAGAGGTCAAAATCAAAACTTGGTGGTGGTTCTTCCAAGGTGGCTCAGCCAGAAGAAGATGTGAAGGAGTTAGATAACACTTGCAAGGTTGAAACTTTCTCTTTGTCTCCAGTGATGACAGAGAGTGAAGGATCTGAGAGTTCTTCACCACTTTCTGATCTTACCTTTGTTGATGTTAATGAGCCTCAGTGGGAAGGTGCTTGTGATAGTTTTAATCTTCAAAAGTACCCTTCTTATGAGATTGATTGGGATTCTCTGTGA 1038 0.4056 MESMMDFYSNMSQFHSDPFRGELMEVLEPFMKSTSPTSTPLSTFSNSSQPSTSTSYSPSPSYFNSSSFLPIHQPNDCSSKSQNFIGFGQSTSSILGLNHLTPSQINQFQTQINLQYMQKFQHNTTTLSFLSPKPISMKHMGAPPIPNKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPNLKHQGSCVGAGYKALHSSVDAKLQAICEGLADMQKKQGNNKTKSEKVAKTSSKRSKSKLGGGSSKVAQPEEDVKELDNTCKVETFSLSPVMTESEGSESSSPLSDLTFVDVNEPQWEGACDSFNLQKYPSYEIDWDSL* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0645 345 MobiDBLite consensus disorder prediction 32 58 - -
Lan14g0645 345 ProSiteProfiles AP2/ERF domain profile. 149 206 IPR001471 GO:0003700|GO:0006355
Lan14g0645 345 Pfam AP2 domain 150 198 IPR001471 GO:0003700|GO:0006355
Lan14g0645 345 SMART rav1_2 149 212 IPR001471 GO:0003700|GO:0006355
Lan14g0645 345 SUPERFAMILY DNA-binding domain 149 206 IPR016177 GO:0003677
Lan14g0645 345 Gene3D AP2/ERF domain 149 207 IPR036955 GO:0003700|GO:0006355
Lan14g0645 345 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 4 344 - -
Lan14g0645 345 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-4 4 344 - -
Lan14g0645 345 PRINTS Ethylene responsive element binding protein signature 150 161 IPR001471 GO:0003700|GO:0006355
Lan14g0645 345 PRINTS Ethylene responsive element binding protein signature 172 188 IPR001471 GO:0003700|GO:0006355
Lan14g0645 345 MobiDBLite consensus disorder prediction 242 285 - -
Lan14g0645 345 MobiDBLite consensus disorder prediction 245 259 - -
Lan14g0645 345 CDD AP2 148 208 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0645 Lan-Chr14 13384605 13386440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0645 1 345 AP2-EREBP Transcription Factor Family AT1G78080 48.774 9.77e-89 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Lan14g0645 AP2 7.8e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0645 K09286 - gmx:100800478 367.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0645 14 13384605 13386440 Lan14g0645 14 13384605 13386440 ECH
Lan15g0843 15 17643013 17653566 Lan14g0645 14 13384605 13386440 LSH
Lan2g0918 2 19826527 19828188 Lan14g0645 14 13384605 13386440 PCT
Lan11g0474 11 3611704 3613568 Lan14g0645 14 13384605 13386440 PCT
Lan9g1112 9 18477692 18479258 Lan14g0645 14 13384605 13386440 PCT
Lan14g0645 14 13384605 13386440 Lan2g0918 2 19826527 19828188 PCT
Lan14g0645 14 13384605 13386440 Lan11g0474 11 3611704 3613568 PCT
Lan14g0645 14 13384605 13386440 Lan9g1112 9 18477692 18479258 PCT