Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0632 ATGCGGTGTCCACCGCCGTCGACTCCTCCTCCTCCGCCGTTGCCTCCCTCGCAACCTTCGCCTATGGACGTCAAAATTTGGCGTGCTTGTGCCGGAGCTTCCGTTCAAATTCCCGTTGTCAATTCTAGGGTTTACTATTTCCCTCAAGGTCATATTGATCAAGCTTCATCAATTCCTGAGGGATTATCTCGTAATGTCTATTCCAATCCCTGCATTCTTTGTCGCATTGTTGATGTTCAATTTCTCGCTGATCATAACACTGATGAGGTTTTCGTTAAACTCATTCTTCACCCTATCAACCGTAACTCTGATTTTCAGAATTATCTCTCTTCTTCTCCTCCTCCTCCACCGGCTATAGCCGGTGGTGGTGATAGTAGAAGTGTTAGTAATAATAGTAGTTCCGGTGACGGTGATGAAAATGCTGTTGTTTCGTTTGCTAAGATTTTGACGCCGTCTGATGCTAACAATGGTGGTGGTTTCTCTGTTCCGAGGTTCTGTGCTGATTCGGTTTTCCCGCCGCTGAATTTCAATGAGGATCCGCCCTTTCAGACTTTGAGGATCATTGATGTGCATGGTAATGTGTGGGAGTTTCGCCACATTTACCGAGGGACGCCGCGCCGGCACTTGCTAACCACTGGCTGGAGCAAGTTCGTCAACTTCAAGAAGATTGTCGCGGGCGATTCAGTGGTTTTCGTTAAGAACTCGAAAGGGGAGGTGTTTGCTGGAGTTCGCCGCTCAAAAAGGGCTTCCACTAGGAGCTGCGGCAGAGGAGGCAATGACACTAATTGGTCCGCGATGATGCTTGCTGTTCGTGGTACAAGGAAGAGGGATGATGATGTGGAGAAGAAGCAGGAGGATACGGTTGTGAAGGAGGGGTTTTCGAGGAACGGGAAGGGGAAATTGGCGCCGGAGGAGGTTGCTGGGGCGGCGGAACTGGCAGCGCAAGGAATGCCGTTTGAGGTTGTGTATTATCCAAGTGCTGGGTGGTCAGATTTTGTGGTGAAGGCAGAGATTGTGGATGCAGCGATGAGGATAATGTGGAGCCCTGGAATGAGAGTGAAGATGGCTGTGGAGACTGAGGATTCGTCTAGGATGAGCTGGTTTCAGGGCACAGTGTCTGCTGTGTGTGTTCCTGAGAATGGGCTGTGGCAAGGTTCTCCTTGGCATAGGATTCAGGTTGCATGGGATGAACCTGAAGTCTTGCAGAATGCAAAGTTTTTCAGCCCTTGGCAGCTTGAACCTGTATCCTCCACACCTACACTTCGCACAGCATTCCCCCTAACCAAAAGGTTTAGAGCCGCTCAGGGTTCTGTGGGTTTAACTGATGGAAAGGGAGACCCTTTCTTTCCTATGACAGGATACACTAATTCAACAATGGGACAGCTTAATCAAACATTGTCGAGTTATGGTACATTTCCTGCCGGCATGCAGGGAGCCAGGCATAATCTATTTTCTACAACTGATTATTACAATTTTTTTAGTGATATGGATAATCTGCGTTTGGGTAATTCCTTTGGCAACTACACAGCGCCAAGCTTGAAAAATGTGTCAACAGAGCTAAATATTGGTAGTTCTCAATCTGACAACTTGTCACCAGATAGCCACTGTAGTTTGCATTCCTTTGGTACAGAATGTGTTGGGATCCACAACTGCAATGCAACGAAACCTGGGTCTGGTTCAATTCAGCTATTCGGTACCACCATTGAAACAAAACAGCCTGTTGAAAGCGTTTTGCATCTTACCGGTTGCACAGGAAATGATAGCTGTAACTGTCACAATGAAATTAAAGACATGGACAATCTGGAACAAGCTTTGGCTTACTCAAAAATGCTGAACAGGCTTGATGATGACAGACATTATTTGTGA 1866 0.4716 MRCPPPSTPPPPPLPPSQPSPMDVKIWRACAGASVQIPVVNSRVYYFPQGHIDQASSIPEGLSRNVYSNPCILCRIVDVQFLADHNTDEVFVKLILHPINRNSDFQNYLSSSPPPPPAIAGGGDSRSVSNNSSSGDGDENAVVSFAKILTPSDANNGGGFSVPRFCADSVFPPLNFNEDPPFQTLRIIDVHGNVWEFRHIYRGTPRRHLLTTGWSKFVNFKKIVAGDSVVFVKNSKGEVFAGVRRSKRASTRSCGRGGNDTNWSAMMLAVRGTRKRDDDVEKKQEDTVVKEGFSRNGKGKLAPEEVAGAAELAAQGMPFEVVYYPSAGWSDFVVKAEIVDAAMRIMWSPGMRVKMAVETEDSSRMSWFQGTVSAVCVPENGLWQGSPWHRIQVAWDEPEVLQNAKFFSPWQLEPVSSTPTLRTAFPLTKRFRAAQGSVGLTDGKGDPFFPMTGYTNSTMGQLNQTLSSYGTFPAGMQGARHNLFSTTDYYNFFSDMDNLRLGNSFGNYTAPSLKNVSTELNIGSSQSDNLSPDSHCSLHSFGTECVGIHNCNATKPGSGSIQLFGTTIETKQPVESVLHLTGCTGNDSCNCHNEIKDMDNLEQALAYSKMLNRLDDDRHYL* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0632 621 MobiDBLite consensus disorder prediction 107 137 - -
Lan14g0632 621 PANTHER AUXIN RESPONSE FACTOR 15 616 - -
Lan14g0632 621 Gene3D - 347 420 - -
Lan14g0632 621 Gene3D - 142 246 IPR015300 -
Lan14g0632 621 Pfam B3 DNA binding domain 145 246 IPR003340 GO:0003677
Lan14g0632 621 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 15 616 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lan14g0632 621 SUPERFAMILY DNA-binding pseudobarrel domain 140 248 IPR015300 -
Lan14g0632 621 ProSiteProfiles B3 DNA-binding domain profile. 145 247 IPR003340 GO:0003677
Lan14g0632 621 SMART B3_2 145 246 IPR003340 GO:0003677
Lan14g0632 621 Pfam Auxin response factor 309 391 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lan14g0632 621 CDD B3_DNA 144 240 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0632 Lan-Chr14 13265071 13269185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0632 22 576 B3 DNA Binding Superfamily AT1G77850 47.687 5.65e-160 470
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lan14g0632 B3 8.1e-20 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0632 - - lang:109326149 1229.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0632 14 13265071 13269185 Lan14g0632 14 13265071 13269185 ECH
Lan14g0632 14 13265071 13269185 Lan3g1585 3 27467391 27471413 LSH
Lan2g0907 2 19662338 19666695 Lan14g0632 14 13265071 13269185 PCT
Lan14g0632 14 13265071 13269185 Lan2g0907 2 19662338 19666695 PCT