Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0628 ATGGTTTCGTTATTGTGCACGTTTTTGTTGCCGGCGATGAATGGTTGCCGATGTTACCGGAGGACTAACATGGGGGCTTTGGAAAAGCTACCCGTGGAGGAGACGTCGTGTCCGTGTCCGGCGGGTTTTCCGGCGTACTTGCCGGAAATCGCGGAGGACTCCTCCGGGAAATTTGGAATGGATTTTTTCTCGCAGGCTTGGAAAGCGCTGAGTGAGCGCTCTCCTTTTGATGTTGTTGCTGGAGAAACGTCGAATTCTGTTGCGGTGGTTACACTGCCGAGTGAGTTGGCGAATTTTTTGAACCGCCACGGTGATAGCCGTCGGGGCCACAAGAAGTCTCCTCACGCTGGTGGTGACAGTGAGAAGAAGAAGAAATCATCTAGGGCGGGCGAGAAGGCGCATGGCTCCAACATTTGGACTGGGATGGAAGTATACTTCAGGGACTTGACATTGTCTGATATTGATACCTTGGCTGAGGCTTCCTCGCTTTGTAATTTAACTTATAGTAAATGTTTTTTGATTCCCCGATTGGAAAATGCTCTGAAATTTGATGTAGTTAGTAGTAAGGATGAGAAAATTGCTGTTCCAACATTCAATCTAGATAGTAATGACAATAAGAAAAATGTTGTTAGTGGGGATGAGAAAAATGCCGATGAAAATGCAAATGGTGTGGATATGAAAATTGAGAACGATTTTGTGGGAATTGAGTCAGTGGACAATGTTGCTGTTGGAAGAGTTTTGCCTCGTGGTGATGAGACTTGTGGTAGTTTAGAGTGGCTTTTAGGTTGTAGGAATAGGGTTTCTTTAACTTCTGAGCGCCCTTCGAAGAAAAGGAAACTTTTGGGTGGTGATGCTGGTTTAGAGAAAGTTGCAATGGCTACTCCTTGTGATGTGGGGCAACCTTTTTGTGATTATTGCAGCAGGGGAGACACTGGCAATGATTCCAATCAGTTAATCGCCTGCACTTCTTGTAAAGTCGTGGTTCATCAAAAGTGCTATGGTGTGCAAGATAATGTAGACGAGTCTTGGTTGTGCTCTTGGTGCAAGCAAATGACTGATATCGATGAGTCGCAGAATCCTTGTGTACTTTGCCCGAAGAAGGGTGGCGCTTTAAAGCCTGTTAATGGCAGCTTTGAAAATGTTGGGTCTGTTCAGTTTGCACACTTGTTTTGCAGTCTGTGGATGCCTGAGGTTTATATAGATGATTTGAAGAAGGTGGAGCCTGTTATGAATGTGGGGGAAATCAAGGAAAACTGTAGGAAATTAGTTTGTAATGTTTGCAAAGTGAAATGTGGTGCATGTGTTCGATGTAGCCATGGAACTTGCAGGGCTTCTTTCCATCCCTTATGTGCAAGGGAAGCTAGACATAGGATGGAAGTTTGGGCGAAGCATGGTGATGATGTTGATGTTAAGTTGCGGGCTTTTTGCTTGAAACACTCAGATCTACAAGAGAATATAAGCACATTTCCATCACGAGGCTCTGTTGCTATTGGTGAATTTTATGAAGCCAAACACCTTCCAGTGACAGTACCACTGGACAGTGAACTCAATGTGAAAATTGGTGTCCAGAATGGAGAGGTAGTATCTGATAGTAGCCCAGAGAAGTTAAACCATAATGAACCCCAAGGTGGAGGATTGTCTGATTGTAGGCTAAGTGCTCATGGCCTGTTGGGATGCGGTGCTGTGGAGCAACATAATATTGGAGTGGTAGGGAAGACCAATGAGAATGTTGACGCATCTGACACTCTCAGTTTTGCACGCATTTTGAAGAAGTTGATAGATCGAGGAAAAGTTGATGCAAAAGATGTTGCATTGGAGATTGGCATTTCACCAGATACATTAACAGCAAATATCAATGAAGCTTATATTGTCCCTGATGTGCGACACAAAATAGTGAATTGGCTAAAAGCCCATGTATATACTACTGCATTTCATGAAGGGGTAAAAGTCAAAATCAAACCAGCCAATGCATCTATTGGTGAAGGTGGAGCTGCCAATGGTTCTGAGAATTTACTGAAATCAGATTCAGGTTTGTTGGATACTATTGCTGTTAAGGCAGTACCACCAAGGAGAAGAACTGTCAGCAACATTAGGATTTTGAAGGATAAAATGATATGTTCATCCAACGGGGTTACTAGTGAGAATGGGATGCCAGTAGACAAGATCAGTGTAGATCAGACTGACCACAAAAATCCAGGAATTTCCAATGAAGCATCAGTTCCTGGTGCAACTGAAATGAATTTGATCAAGTCTGAGGATTTTTGTGCTGCAGTTCGAGGTCCAAGGGAGGAGGGGAATTCTTCAGTTAAATTCTCAGGGGCCAGCGACTGCTCAAGTAGCCAAAATCAGCAATTACCTTGCATTGATTTTTCCAAGCCCGGTCAAGTAAATAAGGAGCAATTGGCTAGGGCTAGAAAAATAGAACCTCTGGATTTTTCTCGAGAAGGTGAAGTGGAGAGGGAACTAATATATTACCAGCATAGACTATTCCAAGATAGAGTTGCAAAGAAAAGGCTAACTGATAACTTAATCCACAATATTGTCAAGAGTTTGCCACAGGAGATTGATATGGCACATCAGCGAAGATGGGATGCTGTGATTGTTAACCGATATCTGTGTGATCTGAAGGAGGCAAAGAAGCAGGGCAGAAAAGAAAAAAGGCATAAGGAAGCACATGCAGTGCTGGCTGCTGCAACTGCTGCTGCTGCAGCATCTACTAGGGTTTCTTCTTTCCGAAAAGACACCTTAGATGAATCTATGCAACAGGAGAATTTGTTAAAGTTGGATACTTTAAGTGGGAGGAATGGTGCTTGTTCTCAACCAATGCCACGAGTCAAAGAGACACTTTCAAGAGTAGCTGTGACAAGAACTTCATCAGAGAAATATTCGGATTTTGGCCTGTCAGCCTCAAATTTCTCCAAGGAGCAGCCTAAATCATGTAATATCTGCAGTCGACCGGAGACTATGTTAAACCCTATCCTAGTCTGCTCTGGTTGCAAGGTTGCAGTGCACTTGGATTGCTATCGTAGTGTGAAAGAAACAATGGGTCCATGGTACTGTGAATTATGTGAAGATTTATCATCTAGAAGCTCTGCAGCATCTACTGTTAATTTCTGGGAGAAGCCTTATTTTGTTGCAGAATGTGCTCTCTGCGGTGGTACTACCGGAGCTTTCAGGAGGTCTTCTGATGGCCAATGGGTTCATGCTTTTTGTGCCGAGTGGGTGTTTGAGTCAACATTCAGAAGAGGACAAATAAATGGTGTCGAAGGAGTGGAGACTATGTTGAAGGGAACTGATACTTGCTGCATCTGCTGCCGCAAGCAAGGTCTATGCATGAAGTGTTGCTACGGCCATTGTCGAACCACATTCCACCCATCCTGTGCTAGAAGTGCTGGTTTGTACATGACTGTCAGGACTGTTGGCAGCAAGCTGCAACACAAGGCTTACTGTGAAAAGCATAGTCTGGAGCAGAAGGAAAAGGCTGGAAAACAGAAATATGGAATTGAAGAGTTTAAAAGAATGAAGCAAATTAGGGTTGAACTAGAGAGATTACGTCTCCTTTGTGAAAGAATTGTCAAACGTGAAAAAATAAAGCGGGAACTGATTCTATGCTCACATGACAAACTTGCCTTCAAAAGGGATCATGTTGCTAGATCTATGCTGGTTCATAGCCCTTTCGCTCTTCCAAATGGCAGTTCAGGATCAGCTATGACGTCCCTCATAGGGAACACTGAGGGATACAGATCATGCAGTGAAGCTGTCGAACAATCAGATGATGTGACTGTGGACAGCTTAGTTTCTGCCAAGCACCGTGTCAGAGTTGCTGTATCCATGGACACAGACCCAAAAGTGGATGATGGCTGCTCAACCTCACAAAGCCACTATAATCACAAGATACTGGAAAAGTTGCAATTTTCTGGCAAGCAGATTCCTCGTAGAGCTTTTGCCACATTGCATTATCATTCCGATGAGGGTGGAAGGAGATCCAAATCTAGGAAGCATGCAGAGACATTTGGAAAAGAGCTTGTTATGACGTCAGATGAAGCATCTATGAAAAATTCAAGGTTACCTAAAGGATATGCATATGTTCCTGCTGATTGCCTGTCAAATGACAAGCACTCTAAGGAGGATTTATATGCTGGTGAACCAGTGGAATGA 4158 0.4363 MVSLLCTFLLPAMNGCRCYRRTNMGALEKLPVEETSCPCPAGFPAYLPEIAEDSSGKFGMDFFSQAWKALSERSPFDVVAGETSNSVAVVTLPSELANFLNRHGDSRRGHKKSPHAGGDSEKKKKSSRAGEKAHGSNIWTGMEVYFRDLTLSDIDTLAEASSLCNLTYSKCFLIPRLENALKFDVVSSKDEKIAVPTFNLDSNDNKKNVVSGDEKNADENANGVDMKIENDFVGIESVDNVAVGRVLPRGDETCGSLEWLLGCRNRVSLTSERPSKKRKLLGGDAGLEKVAMATPCDVGQPFCDYCSRGDTGNDSNQLIACTSCKVVVHQKCYGVQDNVDESWLCSWCKQMTDIDESQNPCVLCPKKGGALKPVNGSFENVGSVQFAHLFCSLWMPEVYIDDLKKVEPVMNVGEIKENCRKLVCNVCKVKCGACVRCSHGTCRASFHPLCAREARHRMEVWAKHGDDVDVKLRAFCLKHSDLQENISTFPSRGSVAIGEFYEAKHLPVTVPLDSELNVKIGVQNGEVVSDSSPEKLNHNEPQGGGLSDCRLSAHGLLGCGAVEQHNIGVVGKTNENVDASDTLSFARILKKLIDRGKVDAKDVALEIGISPDTLTANINEAYIVPDVRHKIVNWLKAHVYTTAFHEGVKVKIKPANASIGEGGAANGSENLLKSDSGLLDTIAVKAVPPRRRTVSNIRILKDKMICSSNGVTSENGMPVDKISVDQTDHKNPGISNEASVPGATEMNLIKSEDFCAAVRGPREEGNSSVKFSGASDCSSSQNQQLPCIDFSKPGQVNKEQLARARKIEPLDFSREGEVERELIYYQHRLFQDRVAKKRLTDNLIHNIVKSLPQEIDMAHQRRWDAVIVNRYLCDLKEAKKQGRKEKRHKEAHAVLAAATAAAAASTRVSSFRKDTLDESMQQENLLKLDTLSGRNGACSQPMPRVKETLSRVAVTRTSSEKYSDFGLSASNFSKEQPKSCNICSRPETMLNPILVCSGCKVAVHLDCYRSVKETMGPWYCELCEDLSSRSSAASTVNFWEKPYFVAECALCGGTTGAFRRSSDGQWVHAFCAEWVFESTFRRGQINGVEGVETMLKGTDTCCICCRKQGLCMKCCYGHCRTTFHPSCARSAGLYMTVRTVGSKLQHKAYCEKHSLEQKEKAGKQKYGIEEFKRMKQIRVELERLRLLCERIVKREKIKRELILCSHDKLAFKRDHVARSMLVHSPFALPNGSSGSAMTSLIGNTEGYRSCSEAVEQSDDVTVDSLVSAKHRVRVAVSMDTDPKVDDGCSTSQSHYNHKILEKLQFSGKQIPRRAFATLHYHSDEGGRRSKSRKHAETFGKELVMTSDEASMKNSRLPKGYAYVPADCLSNDKHSKEDLYAGEPVE* 1386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0628 1385 SUPERFAMILY FYVE/PHD zinc finger 294 350 IPR011011 -
Lan14g0628 1385 Pfam PHD-finger 991 1024 - -
Lan14g0628 1385 Pfam PHD-finger 316 349 - -
Lan14g0628 1385 SMART PHD_3 423 480 IPR001965 -
Lan14g0628 1385 SMART PHD_3 1101 1154 IPR001965 -
Lan14g0628 1385 SMART PHD_3 302 349 IPR001965 -
Lan14g0628 1385 SMART PHD_3 979 1024 IPR001965 -
Lan14g0628 1385 MobiDBLite consensus disorder prediction 111 131 - -
Lan14g0628 1385 PANTHER PHD-FINGER DOMAIN CONTAINING PROTEIN FAMILY-RELATED 130 487 - -
Lan14g0628 1385 PANTHER PHD-FINGER DOMAIN CONTAINING PROTEIN FAMILY-RELATED 794 1376 - -
Lan14g0628 1385 ProSiteProfiles Zinc finger PHD-type profile. 977 1026 IPR019787 -
Lan14g0628 1385 PANTHER PHD FINGER PROTEINS 794 1376 - -
Lan14g0628 1385 PANTHER PHD FINGER PROTEINS 130 487 - -
Lan14g0628 1385 Coils Coil 1174 1194 - -
Lan14g0628 1385 CDD ePHD 1048 1153 - -
Lan14g0628 1385 Pfam PHD-zinc-finger like domain 1047 1153 - -
Lan14g0628 1385 Pfam PHD-zinc-finger like domain 360 479 - -
Lan14g0628 1385 ProSitePatterns Zinc finger PHD-type signature. 303 348 IPR019786 -
Lan14g0628 1385 ProSiteProfiles Extended PHD (ePHD) domain profile. 358 480 IPR034732 -
Lan14g0628 1385 MobiDBLite consensus disorder prediction 101 133 - -
Lan14g0628 1385 ProSitePatterns Zinc finger PHD-type signature. 980 1023 IPR019786 -
Lan14g0628 1385 Coils Coil 1384 1385 - -
Lan14g0628 1385 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 359 482 IPR013083 -
Lan14g0628 1385 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1045 1155 IPR013083 -
Lan14g0628 1385 ProSiteProfiles Zinc finger PHD-type profile. 300 351 IPR019787 -
Lan14g0628 1385 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 956 1035 IPR013083 -
Lan14g0628 1385 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 289 358 IPR013083 -
Lan14g0628 1385 ProSiteProfiles Extended PHD (ePHD) domain profile. 1045 1154 IPR034732 -
Lan14g0628 1385 SUPERFAMILY FYVE/PHD zinc finger 969 1024 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0628 Lan-Chr14 13227851 13238083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0628 302 484 C2H2 Transcription Factor Family AT3G14740 30.108 2.35e-16 80.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Lan14g0628 zf-HC5HC2H_2 5.1e-21 CL0390
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0628 14 13227851 13238083 Lan14g0628 14 13227851 13238083 ECH
Lan15g0824 15 17402220 17412878 Lan14g0628 14 13227851 13238083 LSH