Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0626 ATGGATCGCAAGAAACTCCGTCGTAAACCCAAGTTGGAGCGTCGCAATGCTGTTAAATACTCCGATTACGACGCCGTTTCATCTTCTTCATCCTTCGACGACTCTTCTGGTTCTCTCTACACTATATCGATGGATTTCAATGACCGACCGAGCTTCCGAATCGAAGGAATCGAAGGCGAGTTCGATCGAATTTGCAAGAGTTTGGGTTTATCAGGTCCAGAAGACTTTTCTATCCCTGCTTCCGCGTGGGAGGAGATGAAGTTTCATTCCAATTCTGATATGCTACCGAAGCTGAATATCATTGAGAATGAAGAAAAAGTAGTAGTAGTAGAAGAAGAAGATGATGAAGAAGAAGAAACGAAGGAAATTGAGAGTGAAATTGTTGAGGAATGTGAAGATAGGGTTAGAGATGAACCTGGTGAGGCAAGTGACTGCGGTGGCGGTGGTGGTGGAGGAATTAAGGAGGTTCGTCCATCAATGCTTATGCTGCCGCCGGGGATGAGGGTTCAGGCGGTTGATAGCACGTGCTCCACGTGGGACCTTTTGAGAGATTTTGCTCCTCAAGGTGAAGAGCATAAAGAAGAAGTTGGTGTGGAGAGAGAAGAGGAAGAGGATAATGCAGAGAGGATAGTAGAGATTATTGATGAGCTCTCGGGATCGAGTTCTTTTAGTAATTCAAATGAGGATGATTCTTCTACCACTAACACTGATCCTAGGTCCAATAACATATCTCCTAATGCCAGAATCAAGCGTACTATTACCTCCGGGAATTGGCAGAAGGGCGACCTTTTGGGGCGGGGTTCGTTTGGCTCTGTTTATGAAGGAATTTCTGAAGATGGATTCTTTTTTGCTGTCAAAGAAGTTTCACTGCTTGATCAAGGGAGTCAGGGAAAGCAAAGTGTCTATCAACTGGAGCAGGAGATTGCACTTTTGAGTCAATTTGAGCATGAGAACATAGTTCAATACTATGACACAGAAATGGATGAATCAAAGCTGTATATCTTTCTTGAGCTTGTAACTAAAGGGTCCCTTGCAAGCCTCTACCGGAGATATACTCTTCGAGACTCTCAGGTATCTGCCTATACAAGACAGATTTTGCATGGTTTGAAGTATCTTCATGATCGAAATGTAGTTCACAGGGATATTAAATGTGCTAATATATTGGTGGATGCAAATGGATCCGTGAAGCTGGCAGATTTTGGATTGGCCAAGGCAACCAAATTGAATGATGTTAAATCATGCAAGGGAACAGCATTCTGGATGGCCCCTGAGGTTGTAAAAGGAAAGAACCAAGGTTATGGGCTTCCAGCTGATATGTGGAGTTTGGGATGCACTGTGCTGGAGATGTTAACTGGCCAAATTCCATACTTCGAATTGGAATGTATGCAGGCATTGTTTAGAATTGGAAAAGGCGAGCGACCTCCTATTCCTGATTCTCTTTCAAGAGATGCACAGGATTTCATCACACAGTGTCTTCAAGTTAATCCAGATGAACGTCCCTCTGCTGCTCAACTCTTAAACCACCCATTTGTCCAAAGACCAGTTTCACAGTCCTCCGGTTCTTCATTTCCAAATCCAAATATTCCTGGGAGAAAGGGTTAA 1602 0.437 MDRKKLRRKPKLERRNAVKYSDYDAVSSSSSFDDSSGSLYTISMDFNDRPSFRIEGIEGEFDRICKSLGLSGPEDFSIPASAWEEMKFHSNSDMLPKLNIIENEEKVVVVEEEDDEEEETKEIESEIVEECEDRVRDEPGEASDCGGGGGGGIKEVRPSMLMLPPGMRVQAVDSTCSTWDLLRDFAPQGEEHKEEVGVEREEEEDNAERIVEIIDELSGSSSFSNSNEDDSSTTNTDPRSNNISPNARIKRTITSGNWQKGDLLGRGSFGSVYEGISEDGFFFAVKEVSLLDQGSQGKQSVYQLEQEIALLSQFEHENIVQYYDTEMDESKLYIFLELVTKGSLASLYRRYTLRDSQVSAYTRQILHGLKYLHDRNVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCKGTAFWMAPEVVKGKNQGYGLPADMWSLGCTVLEMLTGQIPYFELECMQALFRIGKGERPPIPDSLSRDAQDFITQCLQVNPDERPSAAQLLNHPFVQRPVSQSSGSSFPNPNIPGRKG* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0626 533 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 48 524 - -
Lan14g0626 533 ProSiteProfiles Protein kinase domain profile. 258 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan14g0626 533 MobiDBLite consensus disorder prediction 512 526 - -
Lan14g0626 533 SMART serkin_6 258 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan14g0626 533 SUPERFAMILY Protein kinase-like (PK-like) 237 515 IPR011009 -
Lan14g0626 533 Pfam Protein kinase domain 259 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan14g0626 533 Gene3D Transferase(Phosphotransferase) domain 1 255 526 - -
Lan14g0626 533 ProSitePatterns Serine/Threonine protein kinases active-site signature. 377 389 IPR008271 GO:0004672|GO:0006468
Lan14g0626 533 ProSitePatterns Protein kinases ATP-binding region signature. 264 286 IPR017441 GO:0005524
Lan14g0626 533 MobiDBLite consensus disorder prediction 185 251 - -
Lan14g0626 533 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 48 524 - -
Lan14g0626 533 PRINTS Tyrosine kinase catalytic domain signature 336 349 IPR001245 GO:0004672|GO:0006468
Lan14g0626 533 PRINTS Tyrosine kinase catalytic domain signature 371 389 IPR001245 GO:0004672|GO:0006468
Lan14g0626 533 PRINTS Tyrosine kinase catalytic domain signature 437 459 IPR001245 GO:0004672|GO:0006468
Lan14g0626 533 PRINTS Tyrosine kinase catalytic domain signature 480 502 IPR001245 GO:0004672|GO:0006468
Lan14g0626 533 MobiDBLite consensus disorder prediction 133 153 - -
Lan14g0626 533 MobiDBLite consensus disorder prediction 512 533 - -
Lan14g0626 533 MobiDBLite consensus disorder prediction 217 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0626 Lan-Chr14 13209881 13216107 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0626 153 515 MAP Kinase Kinase Kinase AT4G08500 59.474 1.45e-145 430
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lan14g0626 Pkinase 4.2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0626 K13414 - gmx:100819999 707.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0626 14 13209881 13216107 Lan14g0626 14 13209881 13216107 ECH
Lan11g0495 11 3823889 3830581 Lan14g0626 14 13209881 13216107 PCT
Lan14g0626 14 13209881 13216107 Lan11g0495 11 3823889 3830581 PCT