Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0601 ATGTCGAGTGAGGATTCAAAGAAGGTGGTGTTTGACGCAGAAGAAGCGTCGTTACTGGTGAAGGATTTAAGAGAAAGCTTTGGTTCAGGTAGAACACGAAGTTACGAGTGGAGAGTGTCGCAGGTGAAGGCTCTTTTGAAGTTGTTGGTTGATAATGAGCAAAAGATTATCGATGCTCTTAGCTCCGACCTCGCTAGACCGCCGTTTGAAACGGTCGTGTATGAGATTGGTATGTTTAAAAACTCATGTGAAGTAACACTAAAGGGGTTGAAGCAATGGATGAAGCCAGAAAAGGTCAAGACTTCGATCACAACTTTTCCATCTTCAGCTGAAATAGTACCTGAACCACTTGGGGTTGTTTTAGTCATCTCTGCATGGAACTATCCATTTTTGTTATCTCTTGATCCAGTCATTGGAGCTATAGCAGCTGGTAATGCTGTCGTTCTAAAACCATCCGAAATTGCTCCGGCCTCATCGGCGCTACTGGCAAAATTGTTAGGGGAGTACATGGATAACTCATGTATAAGAGTTGTTGAGGGGGCAGTTGATGAAACATCTGCACTATTGCAGCAAAAGTGGGACAAAATATTCTATACAGGTAATGGAAGAGTCGGACGCATAGTGATGACCGCTGCTGCGAAACACCTTACACCGGTTGTGTTGGAGCTTGGAGGAAAATCTCCTGTTGTTGTAGATTCAGATGTCAATTTAGAAGTAGCAGCTCGACGGATAATTTCCGGCAAATGGGGGTGTAACAATGGACAAGCCTGCATTTCTCCAGATTATGTTATAACAACAAAAGACTTTGCTCCCAAGTTGGTTGATGCCTTGAAGACTGAATTGGAGAAGTTTTATGGAAAGAACCCTTTGGAATCAGAAGATTTGTCCCGCATTGTGAATTCGAACCACTTCGGTCGCTTGACAAAGCTCTTGGATGATGATAAGGTTTCTGGCAAGATTGTTTATGGAGGTGAAAAGGATGAAAGCAAATTGAGAATTGCTCCAACTCTTTTACTAGATGTTCCACGCGATTCTCTGATTATGAGTGATGAGATATTTGGTCCATTGCTTCCTATCATCACGGTCAACAAAGTGGAAGAAAGCATTGACCTGATCAATTCAGGAACAAAGCCCCTTGCTGCATATTTGTTTACAACTAACAAGAAGCTCACGGAACAGTTTGTAACGAATGTTTCTTCAGGGGGTTTGCTCGTCAATGACACTGTCTTACATCTTGTAGTTCATACCTTGCCATTTGGGGGAGTTGGGGAGAGTGGGATGGGTGGATACCATGGCAAATTCTCCTTTGATGCCTTTAGCCATAAAAAAGCAGTTCTTTATCGCAGTTTCATTGGTGATGGGGCAATAAGGTATCCACCATACACAGATACAAAGCTGAGAGTGATGAGGGCTCTTGTTGGTGGTGGCATTCTCAACATAATTCGTGCTCTTTTTGGATGGTCCTAG 1467 0.4308 MSSEDSKKVVFDAEEASLLVKDLRESFGSGRTRSYEWRVSQVKALLKLLVDNEQKIIDALSSDLARPPFETVVYEIGMFKNSCEVTLKGLKQWMKPEKVKTSITTFPSSAEIVPEPLGVVLVISAWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPASSALLAKLLGEYMDNSCIRVVEGAVDETSALLQQKWDKIFYTGNGRVGRIVMTAAAKHLTPVVLELGGKSPVVVDSDVNLEVAARRIISGKWGCNNGQACISPDYVITTKDFAPKLVDALKTELEKFYGKNPLESEDLSRIVNSNHFGRLTKLLDDDKVSGKIVYGGEKDESKLRIAPTLLLDVPRDSLIMSDEIFGPLLPIITVNKVEESIDLINSGTKPLAAYLFTTNKKLTEQFVTNVSSGGLLVNDTVLHLVVHTLPFGGVGESGMGGYHGKFSFDAFSHKKAVLYRSFIGDGAIRYPPYTDTKLRVMRALVGGGILNIIRALFGWS* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0601 488 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 443 IPR016162 GO:0016491
Lan14g0601 488 PIRSF ALDH 3 481 IPR012394 GO:0006081
Lan14g0601 488 PANTHER ALDEHYDE DEHYDROGENASE 4 488 IPR012394 GO:0006081
Lan14g0601 488 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 221 228 IPR029510 GO:0016491
Lan14g0601 488 Pfam Aldehyde dehydrogenase family 12 445 IPR015590 GO:0016491
Lan14g0601 488 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 225 425 IPR016163 GO:0016620
Lan14g0601 488 PANTHER ALDEHYDE DEHYDROGENASE 4 488 - -
Lan14g0601 488 SUPERFAMILY ALDH-like 17 452 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0601 Lan-Chr14 12835280 12839682 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0601 76 486 Aldehyde Dehydrogenase Gene Family AT1G44170 73.479 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0601 K00128 - gmx:100783726 825.083