Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0598 ATGACCTTAGTTCTCAACAATAGTGAAATGGAGCTTGTGGATTCTAGAAAGCTACAACTAGAGCAACAACATTTTCATGTATTAGCAGTGGATGATAGTGTTATTGATAGGAAACTTTTGGAGAGGCTCCTTAGAGGTTCTTCATGCAAAGTTACATGTGTGGACTCTGGAGACAAGGCTTTGAAGTATCTTGGCTTGAATGAGGACATTGATAATACTAAGTCCTTAACTTCTATAGAACCGTCTTGTCTTCTTCCTCAGCCATTACAAGAAGAGGGAATGAAAGTGAATTTGATAATGACAGACTATTGCATGCCTGGGATGAGTGGCTATGATTTACTTAAACGAGTCAAGGGATCTTCTTGGAAAGATGTTCCAGTGGTGGTTATGTCATCAGAAAATGTACCTTCCAGAATCAGCATGTGCTTAGAAGAAGGGGCAGAAGAATTTCTATTGAAGCCTCTTCAATTATCAGATCTGAAAAAGCTTCAGCCATATTTTATGAAATCCCATAATAATTCTTGTGAACAAGAATCAACTAACACTTCTATAGCTTCAGAAAATGACAATTTCATCATCAACAAAGATAACATTAGTAATAACAACATTAATAGTGTTAGCAAAAGGAAGGCCATTTCTCCTGACCCTCCAGAAAGATCAAGACCAAAAATGAAAGGGTTGGAGGTGGCTTAA 693 0.3737 MTLVLNNSEMELVDSRKLQLEQQHFHVLAVDDSVIDRKLLERLLRGSSCKVTCVDSGDKALKYLGLNEDIDNTKSLTSIEPSCLLPQPLQEEGMKVNLIMTDYCMPGMSGYDLLKRVKGSSWKDVPVVVMSSENVPSRISMCLEEGAEEFLLKPLQLSDLKKLQPYFMKSHNNSCEQESTNTSIASENDNFIINKDNISNNNINSVSKRKAISPDPPERSRPKMKGLEVA* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0598 230 MobiDBLite consensus disorder prediction 212 230 - -
Lan14g0598 230 Pfam Response regulator receiver domain 94 162 IPR001789 GO:0000160
Lan14g0598 230 PANTHER TWO-COMPONENT RESPONSE REGULATOR 19 229 IPR045279 GO:0009736
Lan14g0598 230 Gene3D - 26 200 - -
Lan14g0598 230 SUPERFAMILY CheY-like 25 166 IPR011006 -
Lan14g0598 230 PANTHER TWO-COMPONENT RESPONSE REGULATOR ORR4 19 229 - -
Lan14g0598 230 MobiDBLite consensus disorder prediction 207 230 - -
Lan14g0598 230 CDD REC_typeA_ARR 27 163 - -
Lan14g0598 230 SMART REC_2 25 164 IPR001789 GO:0000160
Lan14g0598 230 ProSiteProfiles Response regulatory domain profile. 26 168 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0598 Lan-Chr14 12790604 12793525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0598 22 188 Response Regulator Gene Family AT3G57040 57.143 1.69e-63 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lan14g0598 Response_reg 5.2e-14 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0598 K14492 - gmx:100786187 319.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0789 15 17045542 17049120 Lan14g0598 14 12790604 12793525 LSH