Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0592 ATGCATCGTGGTTCGTCTTTTTGTTCATCAACTACATCATCTATGGCGAAGCGTCGTGCATCGAACTCGGAGAATAGCAACAATGTTGGCAAGATTAAGAAGCGTCCTCCTCTTACTAACCTCACTAATCACATTGCTTCTCGCAACTCATCTTCCACTTTGGTACCATGTGTTACTAAAGTATCCAAGGCCAAGAAAGAGCCTCTACCATGCACCACTAGCTCAGCAATTTCTAGCAATAAACTACCCTCTTTGACAAATGTTAAATCTACTACAACTATTTTTCCAAAGGCCACTCCTTTACCTCAAAGGGTTGAGGATCCTCCAACAGTTACAACTGTTTCAATCAGCAGCATGGATATTTCTCCAACTAAATCAGATGAAATCTCAGTTTCTATGGATGGGTCAATGTCTTCATGTCATTCTTTCAAGAGCCCTGAGATTGAATATCTTGACAACACTGATGTTTCAACAGTTGATTCAATTGAGAGGAAGACTTTCACCAATCTCAACATCTCTGATACAACAGAGCCAACAGGAAACAAATGCAGTAGAGACATACTTGTTGAGTTGGAAAAAGAGGAAAAAATTATCAATGTTGATAATAATTACAAGGACCCTCAGCTTTGTGCAACCTTTGCTTGTGACATCTACAAGCACCTGCGTGCAACTGAGGTAAAGAAAAGGCCATCCACAGACTTCATGGAGAAAATTCAGAAGGACATGAATCCAAGCATGCGTGCTATATTGATTGACTGGCTTGTAGAGGTGGCTGAAGAATATAGACTTGTACCTGATACATTGTATTTGACAGTGAACTACGTAGATCGGTATCTTTCAGGGAATGTGATGAATAGGCAAAGGTTACAATTACTTGGTGTTGCCTCCATGATGATTGCCTCTAAATATGAGGAGATTTGTGCACCTATGGTGGAGGAATTTTGCTACATAACTGATAACACTTACTTCAAAGAAGAGGTTTTAGAGATGGAATCTGCTGTCTTGAATTTTCTGAAGTTTGAAATGACAGCCCCAACAATTAAATGTTTCTTAAGACGATTTATTCGTGCAGCTCAAGGAGCCACTGAGGCCCCATCACTACAACTAGAGTGCTTGACAAACTACATTGCGGAATTGTCTCTCTTAGAGTACAATATGCTTTGTTATGCTCCATCACTTATAGCCGCTTCTGCAATTTTCCTGGCCAAATTTATACTTTTCCCTTCAATGAAACCTTGGAATTCTACACTGCAGCATTACACACTTTACCATCCTTCTGATTTGTGTGACTGTGTAATGGATCTCCATCGTCTTTGTTGCGGCAGCCCTAATTCTAATTTGCCTGCAATTAGGGAGAAATACAACCAGCATAAGTACAAATATGTGGCCAAGAAGCACTGTCCTCCTTCAATACCACCAGAATTTTTCCAGAATTAA 1437 0.4008 MHRGSSFCSSTTSSMAKRRASNSENSNNVGKIKKRPPLTNLTNHIASRNSSSTLVPCVTKVSKAKKEPLPCTTSSAISSNKLPSLTNVKSTTTIFPKATPLPQRVEDPPTVTTVSISSMDISPTKSDEISVSMDGSMSSCHSFKSPEIEYLDNTDVSTVDSIERKTFTNLNISDTTEPTGNKCSRDILVELEKEEKIINVDNNYKDPQLCATFACDIYKHLRATEVKKRPSTDFMEKIQKDMNPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYVDRYLSGNVMNRQRLQLLGVASMMIASKYEEICAPMVEEFCYITDNTYFKEEVLEMESAVLNFLKFEMTAPTIKCFLRRFIRAAQGATEAPSLQLECLTNYIAELSLLEYNMLCYAPSLIAASAIFLAKFILFPSMKPWNSTLQHYTLYHPSDLCDCVMDLHRLCCGSPNSNLPAIREKYNQHKYKYVAKKHCPPSIPPEFFQN* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0592 478 Pfam Cyclin, C-terminal domain 345 466 IPR004367 -
Lan14g0592 478 CDD CYCLIN 343 436 IPR013763 -
Lan14g0592 478 PANTHER CYCLINS 25 477 IPR039361 -
Lan14g0592 478 PIRSF Cyclin_A_B_D_E 4 474 IPR039361 -
Lan14g0592 478 SUPERFAMILY Cyclin-like 205 342 IPR036915 -
Lan14g0592 478 Pfam Cyclin, N-terminal domain 216 342 IPR006671 -
Lan14g0592 478 SUPERFAMILY Cyclin-like 345 470 IPR036915 -
Lan14g0592 478 SMART Cyclin_C_2 345 468 IPR004367 -
Lan14g0592 478 MobiDBLite consensus disorder prediction 1 33 - -
Lan14g0592 478 ProSitePatterns Cyclins signature. 247 278 IPR006671 -
Lan14g0592 478 MobiDBLite consensus disorder prediction 1 46 - -
Lan14g0592 478 CDD CYCLIN 246 335 IPR013763 -
Lan14g0592 478 Gene3D - 216 464 - -
Lan14g0592 478 PANTHER CYCLIN-A1-1 25 477 - -
Lan14g0592 478 SMART cyclin_7 349 437 IPR013763 -
Lan14g0592 478 SMART cyclin_7 252 336 IPR013763 -
Lan14g0592 478 Gene3D - 230 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0592 Lan-Chr14 12719659 12723364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0592 15 478 Core Cell Cycle Gene Families AT1G44110 60.638 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0592 K06627 - gmx:100789565 730.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0592 14 12719659 12723364 Lan14g0592 14 12719659 12723364 ECH
Lan15g0779 15 16895531 16901550 Lan14g0592 14 12719659 12723364 LSH