Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0551 ATGGACAACATGGGAGATTCATCAAATAACCTCATACATGAGTTGCTACAAGGTTTGGAGTTAGCAAAACAGCTCCAAAAGAATCTCCACATGCCTTCATCTTCTTCTTCTTCTTCCCAAGAAACCTGTGACTTGTTGATTCAGAAGATTATATCAATATTCGAAAAAGCTCTTCAAATGATGAACTGGCAAAGAGGACCATTGGGTGAGCCATCATCTCAACAGTCCTTAGGTGTTACAATCAGAATGTCAGAGTCACCACCTTTAAGTAGTAGTCCTCATAGCGAAGATTCTGATAGAGATTTGATGGAACAAGATCACAATGCTTCGAGAAAAAGAAAGACTTTGCCAAGATGGACAAAACAAATCCGAGTTAACCCAGGAGTGGCAGTGGAATGGCCTCTTGATGATGGATACAATTGGAGAAAATATGGTCAGAAAGACATTCTTGGAGCTGTGTATCCAAGAGGCTACTATAGGTGCACCCACAGAAATGTTAGAGGCTGCTTGGCCACAAAGCAGGTGCAAAGATCTGATGAAGACCCCAATGTGTTTGAAATCACTTACAGAGGAAAACACACATGCACAATGGCCTCCAATACAATTCCTACATCTAATCCAAATGAAAACCAAGAATCAAATTTGAACATAAATCAAAATGTCCTACAAGGCCTTGAGCAGCAACCAAATCCAAATGAACTACTTTTGAACCTTAGGGAAGGCCTAAGAGTCCAAACAGAACACCTAGAATCCTCTCATTACCAACCATTTTCTTCATTCCATTTCCCTTCAAGTTCCAACATTAAAACTGAAAATCAAATTCTAACACCCCCTATGCTTGAAAACTTCAGCCCCCCTTCATATATTTCTCCTGCCACTTCAGGAATAAGCCACTTTTCAGTGTCTCCTAGTGTAGTAAACAACTTAGGAGGGTACCCAAGTATGGTAAGTTCAGGGTTTCAGATCAATGACATGATCTCAGCTACTACTTCAGCAGCAAATTCACCAACTTTTGGCATAGATTTTCCATTTGATCAGTTTGAATTTGATGGCCATAACTTCACATTTGATAACCCACAATTTTTCTCCTAA 1092 0.3984 MDNMGDSSNNLIHELLQGLELAKQLQKNLHMPSSSSSSSQETCDLLIQKIISIFEKALQMMNWQRGPLGEPSSQQSLGVTIRMSESPPLSSSPHSEDSDRDLMEQDHNASRKRKTLPRWTKQIRVNPGVAVEWPLDDGYNWRKYGQKDILGAVYPRGYYRCTHRNVRGCLATKQVQRSDEDPNVFEITYRGKHTCTMASNTIPTSNPNENQESNLNINQNVLQGLEQQPNPNELLLNLREGLRVQTEHLESSHYQPFSSFHFPSSSNIKTENQILTPPMLENFSPPSYISPATSGISHFSVSPSVVNNLGGYPSMVSSGFQINDMISATTSAANSPTFGIDFPFDQFEFDGHNFTFDNPQFFS* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0551 363 Coils Coil 208 228 - -
Lan14g0551 363 SUPERFAMILY WRKY DNA-binding domain 133 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan14g0551 363 Pfam WRKY DNA -binding domain 136 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan14g0551 363 Gene3D WRKY domain 126 198 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan14g0551 363 SMART WRKY_cls 135 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan14g0551 363 MobiDBLite consensus disorder prediction 94 113 - -
Lan14g0551 363 ProSiteProfiles WRKY domain profile. 130 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan14g0551 363 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 361 IPR044810 GO:0003700
Lan14g0551 363 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED 1 361 - -
Lan14g0551 363 MobiDBLite consensus disorder prediction 83 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0551 Lan-Chr14 11703144 11705600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0551 10 217 WRKY Transcription Factor Family AT5G24110 43.721 2.58e-47 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan14g0551 WRKY 1.2e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0551 - - gmx:100776906 435.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0559 15 12888096 12891180 Lan14g0551 14 11703144 11705600 LSH
Lan15g0714 15 15950564 15951893 Lan14g0551 14 11703144 11705600 LSH